RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PLA2G4BP0C869 781 aa18.75■□□□□ 0.59
CPSF4-203ENST00000430038 OR1D2P34982 312 aa18.75■□□□□ 0.59
CPSF4-203ENST00000430038 DMP1Q13316 513 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-203ENST00000430038 CYP26C1Q6V0L0 522 aa18.75■□□□□ 0.59
CPSF4-203ENST00000430038 GRASPQ7Z6J2 395 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-203ENST00000430038 SLC44A3Q8N4M1 653 aa18.75■□□□□ 0.59
CPSF4-203ENST00000430038 DDX27Q96GQ7 796 aaKnown RBP18.75■□□□□ 0.59
CPSF4-203ENST00000430038 SNX27Q96L92 541 aa18.75■□□□□ 0.59
CPSF4-203ENST00000430038 MRPL4Q9BYD3 311 aaKnown RBP18.75■□□□□ 0.59
CPSF4-203ENST00000430038 BLOC1S4Q9NUP1 217 aa18.75■□□□□ 0.59
CPSF4-203ENST00000430038 DUSP12Q9UNI6 340 aa18.75■□□□□ 0.59
CPSF4-203ENST00000430038 ANK1P16157 1881 aa18.75■□□□□ 0.59
CPSF4-203ENST00000430038 ZFHX2Q9C0A1 2572 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-203ENST00000430038 KRBA1A5PL33 1030 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 H3BQV1 296 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 MAPTP10636 758 aaKnown RBP18.74■□□□□ 0.59
CPSF4-203ENST00000430038 LAMP2P13473 410 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 PLS3P13797 630 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 PTPN5P54829 565 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 SLC10A6Q3KNW5 377 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
CPSF4-203ENST00000430038 SPIRE2Q8WWL2 714 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 DRC1Q96MC2 740 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 PIDD1Q9HB75 910 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 HCFC1R1Q9NWW0 138 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 MTRRQ9UBK8 725 aa18.74■□□□□ 0.59
CPSF4-203ENST00000430038 CCL16O15467 120 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 C8AP07357 584 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 MCF2P10911 925 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 HARSP12081 509 aaKnown RBP18.73■□□□□ 0.59
CPSF4-203ENST00000430038 RAB33AQ14088 237 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 LARP1BQ659C4 914 aaKnown RBP18.73■□□□□ 0.59
CPSF4-203ENST00000430038 ARL6IP4Q66PJ3 421 aaKnown RBP18.73■□□□□ 0.59
CPSF4-203ENST00000430038 ASTLQ6HA08 431 aaPredicted RBP18.73■□□□□ 0.59
CPSF4-203ENST00000430038 MPZL3Q6UWV2 235 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 GET4Q7L5D6 327 aaPredicted RBP18.73■□□□□ 0.59
CPSF4-203ENST00000430038 C17orf75Q9HAS0 396 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 IGSF9Q9P2J2 1179 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 DPP7Q9UHL4 492 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 SMC3Q9UQE7 1217 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 RBM19Q9Y4C8 960 aaKnown RBP18.73■□□□□ 0.59
CPSF4-203ENST00000430038 CDY1Q9Y6F8 540 aa18.73■□□□□ 0.59
CPSF4-203ENST00000430038 ANHXE9PGG2 379 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 NRG2O14511 850 aaPredicted RBP18.72■□□□□ 0.59
CPSF4-203ENST00000430038 GALR2O43603 387 aaPredicted RBP18.72■□□□□ 0.59
CPSF4-203ENST00000430038 TBC1D4O60343 1298 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 CFHP08603 1231 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 KCNE1P15382 129 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 CREMQ03060 361 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 SPAG1Q07617 926 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 AXDND1Q5T1B0 1012 aaPredicted RBP18.72■□□□□ 0.59
CPSF4-203ENST00000430038 USP49Q70CQ1 688 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 FLCNQ8NFG4 579 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 ITFG1Q8TB96 612 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 TCHPQ9BT92 498 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 CCDC94Q9BW85 323 aaPredicted RBP18.72■□□□□ 0.59
CPSF4-203ENST00000430038 CNTN3Q9P232 1028 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 KIF3AQ9Y496 699 aa18.72■□□□□ 0.59
CPSF4-203ENST00000430038 PODXLO00592 558 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 TNFSF9P41273 254 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 ELAVL2Q12926 359 aaKnown RBP18.71■□□□□ 0.59
CPSF4-203ENST00000430038 HTR4Q13639 388 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 ZBTB41Q5SVQ8 909 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 SIX5Q8N196 739 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 SLC7A14Q8TBB6 771 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 FGF14Q92915 247 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 UROC1Q96N76 676 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 FIZ1Q96SL8 496 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 REEP2Q9BRK0 252 aa18.71■□□□□ 0.59
CPSF4-203ENST00000430038 DNMT3BQ9UBC3 853 aaKnown RBP18.71■□□□□ 0.59
CPSF4-203ENST00000430038 CFAP54Q96N23 3096 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 FAM189A1O60320 539 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 FSHRP23945 695 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 CLCN5P51795 746 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 YARSP54577 528 aaKnown RBP18.7■□□□□ 0.58
CPSF4-203ENST00000430038 NCKAP1LP55160 1127 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 CUL4AQ13619 759 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 MRPL58Q14197 206 aaKnown RBP18.7■□□□□ 0.58
CPSF4-203ENST00000430038 DHX8Q14562 1220 aaKnown RBP18.7■□□□□ 0.58
CPSF4-203ENST00000430038 MCM6Q14566 821 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 KARSQ15046 597 aaKnown RBP18.7■□□□□ 0.58
CPSF4-203ENST00000430038 PPM1LQ5SGD2 360 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 PARM1Q6UWI2 310 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 STAMQ92783 540 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 PRRX2Q99811 253 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 TIPINQ9BVW5 301 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.7■□□□□ 0.58
CPSF4-203ENST00000430038 ANKFY1Q9P2R3 1169 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 TUBGCP4Q9UGJ1 667 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 BACE2Q9Y5Z0 518 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 NUMBLQ9Y6R0 609 aa18.7■□□□□ 0.58
CPSF4-203ENST00000430038 WDR27A2RRH5 827 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 TOM1L1O75674 476 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 SEC24AO95486 1093 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 HNRNPA1P09651 372 aaKnown RBP eCLIP18.69■□□□□ 0.58
CPSF4-203ENST00000430038 MCL1Q07820 350 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 SF3A1Q15459 793 aaKnown RBP18.69■□□□□ 0.58
CPSF4-203ENST00000430038 SPECC1Q5M775 1068 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 VARS2Q5ST30 1063 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms