RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 GJB7Q6PEY0 223 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 PPFIBP1Q86W92 1011 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 ARHGEF19Q8IW93 802 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 USP38Q8NB14 1042 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 CPLX3Q8WVH0 158 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 BAP1Q92560 729 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
CRIM1-204ENST00000428774 TOX2Q96NM4 488 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 ACAP3Q96P50 834 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 NUP58Q9BVL2 599 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 APOL6Q9BWW8 343 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 PPP1R12CQ9BZL4 782 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 TRIM6Q9C030 488 aaPredicted RBP11.73□□□□□ -0.53
CRIM1-204ENST00000428774 PRDM5Q9NQX1 630 aaPredicted RBP11.73□□□□□ -0.53
CRIM1-204ENST00000428774 CHST12Q9NRB3 414 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 FAM105AQ9NUU6 356 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 CEP72Q9P209 647 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 TBX21Q9UL17 535 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 ZMYND8Q9ULU4 1186 aaPredicted RBP11.73□□□□□ -0.53
CRIM1-204ENST00000428774 CAPN11Q9UMQ6 739 aa11.73□□□□□ -0.53
CRIM1-204ENST00000428774 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
CRIM1-204ENST00000428774 TSC2P49815 1807 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 MEIS3P2A8K0S8 358 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 DCDC2CA8MYV0 355 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 HLA-DRAP01903 254 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 CLTBP09497 229 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 TMEM191BP0C7N4 346 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 ATF7P17544 494 aaPredicted RBP11.72□□□□□ -0.53
CRIM1-204ENST00000428774 AKAP5P24588 427 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 CYP2C18P33260 490 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 PIK3CAP42336 1068 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 BIRC3Q13489 604 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 KLHDC7AQ5VTJ3 777 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 E4F1Q66K89 784 aaPredicted RBP11.72□□□□□ -0.53
CRIM1-204ENST00000428774 IQCEQ6IPM2 695 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 PDXDC1Q6P996 788 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 TMEM139Q8IV31 216 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 CNGA4Q8IV77 575 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 EHBP1Q8NDI1 1231 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 FBXL13Q8NEE6 735 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 DPF3Q92784 378 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 ELMO3Q96BJ8 720 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 IQCDQ96DY2 449 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 IFIH1Q9BYX4 1025 aaKnown RBP11.72□□□□□ -0.53
CRIM1-204ENST00000428774 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 HIPK3Q9H422 1215 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 ASB7Q9H672 318 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 NLRC4Q9NPP4 1024 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 ABHD10Q9NUJ1 306 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 PCDHB2Q9Y5E7 798 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 PTPRSQ13332 1948 aa11.72□□□□□ -0.53
CRIM1-204ENST00000428774 TET1Q8NFU7 2136 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 LRRC53A6NM62 1247 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 TPM1P09493 284 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 UCHL3P15374 230 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 FECHP22830 423 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 KRT9P35527 623 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 RGS19P49795 217 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 GUCY2FP51841 1108 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 AP3M2P53677 418 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 YARSP54577 528 aaKnown RBP11.71□□□□□ -0.53
CRIM1-204ENST00000428774 POLR2FP61218 127 aaKnown RBP11.71□□□□□ -0.53
CRIM1-204ENST00000428774 TFAMQ00059 246 aaKnown RBP11.71□□□□□ -0.53
CRIM1-204ENST00000428774 TMEM132DQ14C87 1099 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 TCTN1Q2MV58 587 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 GLRA4Q5JXX5 417 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 TRAPPC11Q7Z392 1133 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 GPIHBP1Q8IV16 184 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 LRRC8AQ8IWT6 810 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 LPPQ93052 612 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 SCLYQ96I15 445 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 ANKRD36BP1Q96IX9 119 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 ZMAT2Q96NC0 199 aaKnown RBP11.71□□□□□ -0.53
CRIM1-204ENST00000428774 DNAJC7Q99615 494 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 PI4K2AQ9BTU6 479 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
CRIM1-204ENST00000428774 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.71□□□□□ -0.53
CRIM1-204ENST00000428774 TMEM39AQ9NV64 488 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 KLK14Q9P0G3 267 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 CNTN3Q9P232 1028 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 APEX2Q9UBZ4 518 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 PARP2Q9UGN5 583 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 FBXL5Q9UKA1 691 aa11.71□□□□□ -0.53
CRIM1-204ENST00000428774 COL4A6Q14031 1691 aa11.71□□□□□ -0.54
CRIM1-204ENST00000428774 EVI5O60447 810 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 TNNC2P02585 160 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
CRIM1-204ENST00000428774 RAB27AP51159 221 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 CCL23P55773 120 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 JAM2P57087 298 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 ZBED6P86452 979 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 CETN1Q12798 172 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 XKR4Q5GH76 650 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 SPOPLQ6IQ16 392 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 CACNA2D4Q7Z3S7 1137 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
CRIM1-204ENST00000428774 CD302Q8IX05 232 aa11.7□□□□□ -0.54
CRIM1-204ENST00000428774 C1orf127Q8N9H9 656 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms