RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 VAV3Q9UKW4 847 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 PADI3Q9ULW8 664 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 TRPV2Q9Y5S1 764 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 CEP295Q9C0D2 2601 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 KDM3AQ9Y4C1 1321 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 FRYQ5TBA9 3013 aa9.56□□□□□ -0.88
HDAC1-202ENST00000428704 FLNBO75369 2602 aaKnown RBP9.55□□□□□ -0.88
HDAC1-202ENST00000428704 MYL1P05976 194 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 SRFP11831 508 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 GLULP15104 373 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 BMP6P22004 513 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 KLRC1P26715 233 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 SFNP31947 248 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 JAK3P52333 1124 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 GSDMDP57764 484 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 PRKCEQ02156 737 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 BMS1Q14692 1282 aaKnown RBP9.55□□□□□ -0.88
HDAC1-202ENST00000428704 FAM102BQ5T8I3 360 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 N4BP2L1Q5TBK1 243 aaPredicted RBP9.55□□□□□ -0.88
HDAC1-202ENST00000428704 USP49Q70CQ1 688 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 SCUBE3Q8IX30 993 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 KIAA0319LQ8IZA0 1049 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 RDM1Q8NG50 284 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 SMARCE1Q969G3 411 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 PAGE5Q96GU1 130 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 AK8Q96MA6 479 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 ZNF558Q96NG5 402 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 CEP89Q96ST8 783 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 BCO2Q9BYV7 579 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 FOXQ1Q9C009 403 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 HSD3B7Q9H2F3 369 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 KCNF1Q9H3M0 494 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 CWH43Q9H720 699 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 KCND1Q9NSA2 647 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 ZSCAN32Q9NX65 697 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 TCEAL9Q9UHQ7 104 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 MAN1B1Q9UKM7 699 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 RAB23Q9ULC3 237 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 SAMM50Q9Y512 469 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 SQORQ9Y6N5 450 aa9.55□□□□□ -0.88
HDAC1-202ENST00000428704 FNDC1Q4ZHG4 1894 aaPredicted RBP9.55□□□□□ -0.88
HDAC1-202ENST00000428704 ZZEF1O43149 2961 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 TMEM150BA6NC51 233 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 EML1O00423 815 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 BIN1O00499 593 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 CBFA2T2O43439 604 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 CCNT1O60563 726 aaKnown RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 LRRN2O75325 713 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 RPLP2P05387 115 aaKnown RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 FGFR1P11362 822 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 GCFC2P16383 781 aaKnown RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 EPCAMP16422 314 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 GBP2P32456 591 aaPredicted RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 PBX3P40426 434 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 SPIRE1Q08AE8 756 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 DPYDQ12882 1025 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 PPP2R5CQ13362 524 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 TARBP2Q15633 366 aaKnown RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 IL17AQ16552 155 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 DCLRE1AQ6PJP8 1040 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 KCNT2Q6UVM3 1135 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 TRMT1LQ7Z2T5 733 aaKnown RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 MIER3Q7Z3K6 550 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 GPR149Q86SP6 731 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 LRRC8AQ8IWT6 810 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 DRC7Q8IY82 874 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 SLC44A3Q8N4M1 653 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 ZBTB44Q8NCP5 570 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 TMEM40Q8WWA1 233 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 EPSTI1Q96J88 318 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 FAM167AQ96KS9 214 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 CELF4Q9BZC1 486 aaKnown RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 SFXN1Q9H9B4 322 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 SPG21Q9NZD8 308 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 WRAP73Q9P2S5 460 aaPredicted RBP9.54□□□□□ -0.88
HDAC1-202ENST00000428704 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
HDAC1-202ENST00000428704 A0A087X0B3 334 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.53□□□□□ -0.88
HDAC1-202ENST00000428704 DENND3A2RUS2 1198 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 VWA3AA6NCI4 1184 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 C1QTNF9BB2RNN3 333 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 TBX3O15119 743 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 LILRB5O75023 590 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 ZIC2O95409 532 aaPredicted RBP9.53□□□□□ -0.88
HDAC1-202ENST00000428704 CXCL14O95715 111 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 C1QTNF9P0C862 333 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 MCM7P33993 719 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 CLCN3P51790 818 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 PTPN14Q15678 1187 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 TMEM266Q2M3C6 531 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 IL31Q6EBC2 164 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 UNQ6494/PRO21346Q6UXR6 183 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 DTHD1Q6ZMT9 781 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 SPC24Q8NBT2 197 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 FEZF2Q8TBJ5 459 aa9.53□□□□□ -0.88
HDAC1-202ENST00000428704 FAM20AQ96MK3 541 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms