RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 POU5F1Q01860 360 aaKnown RBP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 ENPEPQ07075 957 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 PPP3CAQ08209 521 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 CETN1Q12798 172 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 KCNH2Q12809 1159 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 DUOXA2Q1HG44 320 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 MIIPQ5JXC2 388 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 C1orf220Q5T0J3 134 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 AGMOQ6ZNB7 445 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 OTOP2Q7RTS6 562 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 APTXQ7Z2E3 356 aaKnown RBP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 MRPL10Q7Z7H8 261 aaKnown RBP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZNF598Q86UK7 904 aaKnown RBP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 RTN4RL1Q86UN2 441 aaPredicted RBP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 CD302Q8IX05 232 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 EFCAB13Q8IY85 973 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 OR5B17Q8NGF7 314 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 URGCPQ8TCY9 931 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 HELQQ8TDG4 1101 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 ANKRD36BP1Q96IX9 119 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 NAP1L5Q96NT1 182 aaPredicted RBP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMEM8AQ9HCN3 771 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 UBN1Q9NPG3 1134 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 RNF19AQ9NV58 838 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 INTS13Q9NVM9 706 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 GCNT4Q9P109 453 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 CNTN3Q9P232 1028 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 GIT1Q9Y2X7 761 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 DERAQ9Y315 318 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 R3HCC1Q9Y3T6 440 aaKnown RBP8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 C2CD2Q9Y426 696 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 PCDHB7Q9Y5E2 793 aa8.56□□□□□ -1.04
HMGA1P4-201ENST00000428643 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 HOXA2O43364 376 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 XPOTO43592 962 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 UPP2O95045 317 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 ADCY5O95622 1261 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 FGBP02675 491 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 SCNN1GP51170 649 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 EPHB4P54760 987 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 WDR5P61964 334 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 FAM189BP81408 668 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 RNASELQ05823 741 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 TRPC3Q13507 836 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 SYCP1Q15431 976 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 PTPN21Q16825 1174 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 CBWD6Q4V339 395 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 NOMO2Q5JPE7 1267 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 CBWD3Q5JTY5 395 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 CLLU1OSQ5K130 101 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 CBWD5Q5RIA9 395 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 TDRD10Q5VZ19 366 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 KRT39Q6A163 491 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 FAM117BQ6P1L5 589 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZNF365Q70YC5 407 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 SV2AQ7L0J3 742 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 BEST2Q8NFU1 509 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 CACTINQ8WUQ7 758 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 C18orf25Q96B23 403 aaPredicted RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 VWCEQ96DN2 955 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 CRACR2AQ9BSW2 395 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMEM117Q9H0C3 514 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 INTS2Q9H0H0 1204 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 CXCL16Q9H2A7 254 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 MTIF3Q9H2K0 278 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 ELAC1Q9H777 363 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 SLC38A7Q9NVC3 462 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 TUBGCP4Q9UGJ1 667 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 DNAH12Q6ZR08 3092 aa8.55□□□□□ -1.04
HMGA1P4-201ENST00000428643 GTPBP10A4D1E9 387 aaKnown RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 LRRC10BA6NIK2 292 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 PTGESO14684 152 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 P4HA2O15460 535 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 TEX33O43247 280 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 POMCP01189 267 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 HLA-DRAP01903 254 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 THP07101 528 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 KRT19P08727 400 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 POLR2BP30876 1174 aaKnown RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 MAGEA10P43363 369 aaPredicted RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 GATMP50440 423 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 CLDN10P78369 228 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 DEFB103AP81534 67 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 GRIK3Q13003 919 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 NCOA4Q13772 614 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 EXOC3L4Q17RC7 722 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZACNQ401N2 412 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 XKR4Q5GH76 650 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 GBP6Q6ZN66 633 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 C16orf59Q7L2K0 433 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 TRAPPC11Q7Z392 1133 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 NT5DC4Q86YG4 428 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 DRC7Q8IY82 874 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 C1orf127Q8N9H9 656 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 CCDC150Q8NCX0 1101 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms