RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 SELPP16109 830 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 AKAP5P24588 427 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 GUCY2FP51841 1108 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 ZBED6P86452 979 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 CETN1Q12798 172 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 SURF1Q15526 300 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 SLC10A6Q3KNW5 377 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 GLRA4Q5JXX5 417 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 SCARA3Q6AZY7 606 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 RRAGAQ7L523 313 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 SMG8Q8ND04 991 aaKnown RBP13.04□□□□□ -0.32
RFC4-206ENST00000427785 EHBP1Q8NDI1 1231 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 FBXL13Q8NEE6 735 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 DNAJC7Q99615 494 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 SEZ6LQ9BYH1 1024 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 TMX1Q9H3N1 280 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
RFC4-206ENST00000427785 ZKSCAN5Q9Y2L8 839 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 IPPQ9Y573 584 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 TSC2P49815 1807 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 SOWAHDA6NJG2 315 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 PMM2O15305 246 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 PHACTR2O75167 634 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 TNNC2P02585 160 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 SKILP12757 684 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 YARSP54577 528 aaKnown RBP13.03□□□□□ -0.32
RFC4-206ENST00000427785 BFSP2Q13515 415 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 TMEM132DQ14C87 1099 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 CCDC112Q8NEF3 446 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 ZNF397Q8NF99 534 aaPredicted RBP13.03□□□□□ -0.32
RFC4-206ENST00000427785 KAT5Q92993 513 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 ANKRD36BP1Q96IX9 119 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 NT5C1BQ96P26 610 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 BAG1Q99933 345 aaPredicted RBP13.03□□□□□ -0.32
RFC4-206ENST00000427785 PPP1R12CQ9BZL4 782 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 C11orf49Q9H6J7 331 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 RNF19AQ9NV58 838 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 KLK14Q9P0G3 267 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 APEX2Q9UBZ4 518 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 PARP2Q9UGN5 583 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 DNAJC12Q9UKB3 198 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 ATP11BQ9Y2G3 1177 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 COQ4Q9Y3A0 265 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 FNDC1Q4ZHG4 1894 aaPredicted RBP13.03□□□□□ -0.32
RFC4-206ENST00000427785 PTPRSQ13332 1948 aa13.03□□□□□ -0.32
RFC4-206ENST00000427785 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.32
RFC4-206ENST00000427785 NRDCO43847 1150 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 FECHP22830 423 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 JAM2P57087 298 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 TLE2Q04725 743 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 NCOA4Q13772 614 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 DSC3Q14574 896 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 ARHGAP44Q17R89 818 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 C17orf53Q8N3J3 647 aaPredicted RBP13.02□□□□□ -0.33
RFC4-206ENST00000427785 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 OR8K1Q8NGG5 319 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 LPPQ93052 612 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 PAWRQ96IZ0 340 aaKnown RBP13.02□□□□□ -0.33
RFC4-206ENST00000427785 SPAG5Q96R06 1193 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 NAA15Q9BXJ9 866 aaKnown RBP13.02□□□□□ -0.33
RFC4-206ENST00000427785 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 ASB7Q9H672 318 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 C1orf112Q9NSG2 853 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 FAM105AQ9NUU6 356 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 RAB20Q9NX57 234 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 PCDHB2Q9Y5E7 798 aa13.02□□□□□ -0.33
RFC4-206ENST00000427785 TTC3P53804 2025 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 MEIS3P2A8K0S8 358 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 DCDC2CA8MYV0 355 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 F8VZ95 297 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 ZSCAN20P17040 1043 aaPredicted RBP13.01□□□□□ -0.33
RFC4-206ENST00000427785 RFX1P22670 979 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 AP3M2P53677 418 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 NOP14P78316 857 aaKnown RBP13.01□□□□□ -0.33
RFC4-206ENST00000427785 ARID5AQ03989 594 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 FAAP100Q0VG06 881 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 MTF1Q14872 753 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 DRAP1Q14919 205 aaPredicted RBP13.01□□□□□ -0.33
RFC4-206ENST00000427785 ASIC2Q16515 512 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 DUOXA2Q1HG44 320 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 LRRC26Q2I0M4 334 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 SFMBT2Q5VUG0 894 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 WDR59Q6PJI9 974 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 TRAPPC11Q7Z392 1133 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 ANKRD33Q7Z3H0 272 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 ZSCAN30Q86W11 494 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 PPM1KQ8N3J5 372 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 C1orf127Q8N9H9 656 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 USP38Q8NB14 1042 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 RNF169Q8NCN4 708 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 LINC01599Q8WXQ3 324 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 TATDN2Q93075 761 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 SCLYQ96I15 445 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 ZMAT2Q96NC0 199 aaKnown RBP13.01□□□□□ -0.33
RFC4-206ENST00000427785 ARID3AQ99856 593 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms