RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PIK3R5Q8WYR1 880 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 DDX27Q96GQ7 796 aaKnown RBP20.14■□□□□ 0.81
GPC1-205ENST00000427506 PLEKHA4Q9H4M7 779 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 STK17AQ9UEE5 414 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 TBX20Q9UMR3 447 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 C5orf42Q9H799 3197 aa20.14■□□□□ 0.81
GPC1-205ENST00000427506 HNRNPDLO14979 420 aaKnown RBP20.13■□□□□ 0.81
GPC1-205ENST00000427506 RFPL2O75678 378 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 C1RP00736 705 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 KCNE1P15382 129 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 SOX4Q06945 474 aaPredicted RBP20.13■□□□□ 0.81
GPC1-205ENST00000427506 SLC39A14Q15043 492 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 STK38Q15208 465 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 PTPN21Q16825 1174 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.13■□□□□ 0.81
GPC1-205ENST00000427506 PLCD3Q8N3E9 789 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 KREMEN2Q8NCW0 462 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 CMASQ8NFW8 434 aaPredicted RBP20.13■□□□□ 0.81
GPC1-205ENST00000427506 LNX1Q8TBB1 728 aaPredicted RBP20.13■□□□□ 0.81
GPC1-205ENST00000427506 ACSF2Q96CM8 615 aaPredicted RBP20.13■□□□□ 0.81
GPC1-205ENST00000427506 ZMAT2Q96NC0 199 aaKnown RBP20.13■□□□□ 0.81
GPC1-205ENST00000427506 PIDD1Q9HB75 910 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 CNTN3Q9P232 1028 aa20.13■□□□□ 0.81
GPC1-205ENST00000427506 MYH11P35749 1972 aa20.12■□□□□ 0.81
GPC1-205ENST00000427506 PODXLO00592 558 aa20.12■□□□□ 0.81
GPC1-205ENST00000427506 ABCD1P33897 745 aa20.12■□□□□ 0.81
GPC1-205ENST00000427506 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
GPC1-205ENST00000427506 TRIM67Q6ZTA4 783 aa20.12■□□□□ 0.81
GPC1-205ENST00000427506 SV2BQ7L1I2 683 aa20.12■□□□□ 0.81
GPC1-205ENST00000427506 DYMQ7RTS9 669 aa20.12■□□□□ 0.81
GPC1-205ENST00000427506 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
GPC1-205ENST00000427506 SMG7Q92540 1137 aaKnown RBP20.12■□□□□ 0.81
GPC1-205ENST00000427506 ZNF396Q96N95 335 aaPredicted RBP20.12■□□□□ 0.81
GPC1-205ENST00000427506 CLSTN3Q9BQT9 956 aa20.12■□□□□ 0.81
GPC1-205ENST00000427506 USTQ9Y2C2 406 aa20.12■□□□□ 0.81
GPC1-205ENST00000427506 I3L4J1 428 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 CLTAP09496 248 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 IGFBP6P24592 240 aaPredicted RBP20.11■□□□□ 0.81
GPC1-205ENST00000427506 NMT1P30419 496 aaKnown RBP20.11■□□□□ 0.81
GPC1-205ENST00000427506 BRCC3P46736 316 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 SLC10A6Q3KNW5 377 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 LILRA6Q6PI73 481 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 CYP26C1Q6V0L0 522 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 CCDC73Q6ZRK6 1079 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 OTOP3Q7RTS5 596 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 C3orf58Q8NDZ4 430 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 C18orf25Q96B23 403 aaPredicted RBP20.11■□□□□ 0.81
GPC1-205ENST00000427506 PANK2Q9BZ23 570 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 HAPLN2Q9GZV7 340 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 NUB1Q9Y5A7 615 aa20.11■□□□□ 0.81
GPC1-205ENST00000427506 PLXNA3P51805 1871 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 TMEM221A6NGB7 291 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 M0R296 226 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 CXCL8P10145 99 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 FGFR3P22607 806 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 TKTP29401 623 aaKnown RBP20.1■□□□□ 0.81
GPC1-205ENST00000427506 RPL9P32969 192 aaKnown RBP20.1■□□□□ 0.81
GPC1-205ENST00000427506 STAT6P42226 847 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 KYAT1Q16773 422 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 LIN9Q5TKA1 542 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 HFE2Q6ZVN8 426 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 ZDHHC14Q8IZN3 488 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 DDX12PQ92771 950 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 KCNN1Q92952 543 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 ZDHHC7Q9NXF8 308 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 TFIP11Q9UBB9 837 aaKnown RBP20.1■□□□□ 0.81
GPC1-205ENST00000427506 LIMD1Q9UGP4 676 aa20.1■□□□□ 0.81
GPC1-205ENST00000427506 MORC2Q9Y6X9 1032 aaPredicted RBP20.1■□□□□ 0.81
GPC1-205ENST00000427506 MEFVO15553 781 aaPredicted RBP20.09■□□□□ 0.81
GPC1-205ENST00000427506 PIGRP01833 764 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 OR1D2P34982 312 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 TNFSF9P41273 254 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 NASPP49321 788 aaPredicted RBP20.09■□□□□ 0.81
GPC1-205ENST00000427506 GTF2BQ00403 316 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 PPP2R3AQ06190 1150 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 SPAG1Q07617 926 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 SIGLEC14Q08ET2 396 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 ZC2HC1CQ53FD0 456 aaPredicted RBP20.09■□□□□ 0.81
GPC1-205ENST00000427506 CD300LGQ6UXG3 332 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 ANKS3Q6ZW76 656 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 LINC00301Q8NCQ3 95 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 STAMQ92783 540 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 PBXIP1Q96AQ6 731 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 KIF12Q96FN5 646 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 MFSD14AQ96MC6 490 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 PLEKHA5Q9HAU0 1116 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 MTRRQ9UBK8 725 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 SORCS3Q9UPU3 1222 aa20.09■□□□□ 0.81
GPC1-205ENST00000427506 MYMKA6NI61 221 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 SPTLC2O15270 562 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 OGTO15294 1046 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 ADAM12O43184 909 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 ZMYND10O75800 440 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 ASGR2P07307 311 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 PDIA4P13667 645 aaKnown RBP20.08■□□□□ 0.81
GPC1-205ENST00000427506 GBP2P32456 591 aaPredicted RBP20.08■□□□□ 0.81
GPC1-205ENST00000427506 MTMR3Q13615 1198 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 PPM1LQ5SGD2 360 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 SFR1Q86XK3 245 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 MAP4K3Q8IVH8 894 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms