RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ALBP02768 609 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 MRPS25P82663 173 aaKnown RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 NCF4Q15080 339 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 MAPRE1Q15691 268 aaKnown RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 UGT3A1Q6NUS8 523 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 PLA2G4AP47712 749 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 MED15Q96RN5 788 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 PLEKHA5Q9HAU0 1116 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 ARHGEF5Q12774 1597 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 KRT17Q04695 432 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 KCNV2Q8TDN2 545 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 FRMD8P1Q9BZ68 369 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 SAC3D1A6NKF1 404 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 STX3Q13277 289 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 TTC39BQ5VTQ0 682 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 ABT1Q9ULW3 272 aaKnown RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 GFPT1Q06210 699 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 KCNB1Q14721 858 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 PADI6Q6TGC4 694 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 PRMT1Q99873 361 aaKnown RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 FAM167BQ9BTA0 163 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 UBA6A0AVT1 1052 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 ATXN3P54252 364 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 ALDH18A1P54886 795 aaKnown RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 PTK6Q13882 451 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 PFKFB3Q16875 520 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-203ENST00000427191 FGD2Q7Z6J4 655 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 CCDC24Q8N4L8 307 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 IMPAD1Q9NX62 359 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 PKP1Q13835 747 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 SNX17Q15036 470 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 SLC27A3Q5K4L6 730 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 SYCP2LQ5T4T6 812 aa15.16■□□□□ 0.02
PTPN13-203ENST00000427191 CFAP99D6REC4 459 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 NFIBO00712 420 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 CYBBP04839 570 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 COASYQ13057 564 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 APBB2Q92870 758 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 RNPC3Q96LT9 517 aaKnown RBP15.15■□□□□ 0.02
PTPN13-203ENST00000427191 FCGR1AP12314 374 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 VHLP40337 213 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 NDUFA5Q16718 116 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 Q3C1V9 767 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 FAM102AQ5T9C2 384 aaPredicted RBP15.15■□□□□ 0.02
PTPN13-203ENST00000427191 PASD1Q8IV76 773 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 PCDHB6Q9Y5E3 794 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 SPRP35270 261 aaPredicted RBP15.15■□□□□ 0.02
PTPN13-203ENST00000427191 RGS2P41220 211 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 NCAPHQ15003 741 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 TWF2Q6IBS0 349 aaKnown RBP15.15■□□□□ 0.02
PTPN13-203ENST00000427191 TRPM8Q7Z2W7 1104 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 LINC00523Q86TU6 105 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 ENO1P06733 434 aaKnown RBP15.15■□□□□ 0.02
PTPN13-203ENST00000427191 KRT20P35900 424 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 KCNK10P57789 538 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 TPI1P60174 286 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 SPDYAQ5MJ70 313 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 STAG2Q8N3U4 1231 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 SOX13Q9UN79 622 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 INPP5FQ9Y2H2 1132 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 FTLP02792 175 aaPredicted RBP15.15■□□□□ 0.02
PTPN13-203ENST00000427191 CDH6P55285 790 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 OSTNP61366 133 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 SIKE1Q9BRV8 207 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 FBXL5Q9UKA1 691 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 SERPINB3P29508 390 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 IKBIPQ70UQ0 350 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 GRAMD1CQ8IYS0 662 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 KRT78Q8N1N4 520 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 PGBD4Q96DM1 585 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 SENP7Q9BQF6 1050 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 OSBPL8Q9BZF1 889 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 GREM2Q9H772 168 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 MOSPD1Q9UJG1 213 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 BNIP3LO60238 219 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 FAM45BPQ6NSW5 357 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 RASGRP4Q8TDF6 673 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 ARHGEF38Q9NXL2 777 aa15.15■□□□□ 0.02
PTPN13-203ENST00000427191 UTP6Q9NYH9 597 aaKnown RBP15.15■□□□□ 0.02
PTPN13-203ENST00000427191 STX5Q13190 355 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 DDX17Q92841 729 aaKnown RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 RXRGP48443 463 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 ZNF200P98182 395 aaPredicted RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 C6orf10Q5SRN2 563 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 PTPRN2Q92932 1015 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 ALDH1A1P00352 501 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 TALDO1P37837 337 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 EIF3EP60228 445 aaKnown RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 KDSRQ06136 332 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 DRAP1Q14919 205 aaPredicted RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 EDC3Q96F86 508 aaKnown RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 THOC1Q96FV9 657 aaKnown RBP15.14■□□□□ 0.01
PTPN13-203ENST00000427191 LZTS1Q9Y250 596 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 USP17L3A6NCW0 530 aa15.14■□□□□ 0.01
PTPN13-203ENST00000427191 USP17L4A6NCW7 530 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms