RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 AGMOQ6ZNB7 445 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 MAP4K3Q8IVH8 894 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 ZNF592Q92610 1267 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 ERCC4Q92889 916 aaPredicted RBP8.12□□□□□ -1.11
LINC01049-201ENST00000426840 HVCN1Q96D96 273 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 MRPL4Q9BYD3 311 aaKnown RBP8.12□□□□□ -1.11
LINC01049-201ENST00000426840 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 HAPLN2Q9GZV7 340 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 RC3H2Q9HBD1 1191 aaKnown RBP8.12□□□□□ -1.11
LINC01049-201ENST00000426840 SLC39A2Q9NP94 309 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
LINC01049-201ENST00000426840 HES2Q9Y543 173 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 INSL6Q9Y581 213 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 PCDHA5Q9Y5H7 936 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 PCDHA11Q9Y5I1 949 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 STYXL1Q9Y6J8 313 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 LCHNA4D1U4 455 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 TISP43B9A030 160 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 KINO60870 393 aaKnown RBP8.11□□□□□ -1.11
LINC01049-201ENST00000426840 OFD1O75665 1012 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 TOM1L1O75674 476 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 ARHGEF15O94989 841 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 GCNT3O95395 438 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 MCM4P33991 863 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 SCTRP47872 440 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 RAB27AP51159 221 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 AFF1P51825 1210 aaKnown RBP8.11□□□□□ -1.11
LINC01049-201ENST00000426840 ALCAMQ13740 583 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 KCNB1Q14721 858 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 CLLU1OSQ5K130 101 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 MPZL3Q6UWV2 235 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 KIAA0895Q8NCT3 520 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 GPT2Q8TD30 523 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 SCFD1Q8WVM8 642 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 LPPQ93052 612 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 PGBD4Q96DM1 585 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 CASD1Q96PB1 797 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 GSDMAQ96QA5 445 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 ACCSQ96QU6 501 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 CDT1Q9H211 546 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 MIOSQ9NXC5 875 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 LRFN2Q9ULH4 789 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 IPPQ9Y573 584 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 COL4A6Q14031 1691 aa8.11□□□□□ -1.11
LINC01049-201ENST00000426840 A0A0B4J269 797 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 FIGNL2A6NMB9 653 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 INPPL1O15357 1258 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 EIF3DO15371 548 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC01049-201ENST00000426840 CLDN3O15551 220 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 MEFVO15553 781 aaPredicted RBP8.1□□□□□ -1.11
LINC01049-201ENST00000426840 TGFB1I1O43294 461 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 MAN1A2O60476 641 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 ADH1AP07327 375 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 LINC00271P0C7V0 271 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 MCF2P10911 925 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 ITGA4P13612 1032 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 IBSPP21815 317 aaPredicted RBP8.1□□□□□ -1.11
LINC01049-201ENST00000426840 AKAP5P24588 427 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 ADSSP30520 456 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 LIG4P49917 911 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 MCL1Q07820 350 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 RAB30Q15771 203 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 BMT2Q1RMZ1 405 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 DCAF4L1Q3SXM0 396 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 LRRC55Q6ZSA7 311 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 TMEM192Q8IY95 271 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 CMTR2Q8IYT2 770 aaKnown RBP8.1□□□□□ -1.11
LINC01049-201ENST00000426840 CEP120Q8N960 986 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 RNF169Q8NCN4 708 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 GSTCDQ8NEC7 633 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 CCDC34Q96HJ3 373 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 INSM2Q96T92 566 aaPredicted RBP8.1□□□□□ -1.11
LINC01049-201ENST00000426840 YME1L1Q96TA2 773 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 ADPGKQ9BRR6 497 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 TCHPQ9BT92 498 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 TMEM117Q9H0C3 514 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 CXCL16Q9H2A7 254 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 NKX2-4Q9H2Z4 354 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 NXF3Q9H4D5 531 aaKnown RBP8.1□□□□□ -1.11
LINC01049-201ENST00000426840 TMEM206Q9H813 350 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 EXOC1Q9NV70 894 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 SNTG2Q9NY99 539 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 MSRAQ9UJ68 235 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 EXOC7Q9UPT5 735 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 GDAQ9Y2T3 454 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 GIT1Q9Y2X7 761 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 GBF1Q92538 1859 aa8.1□□□□□ -1.11
LINC01049-201ENST00000426840 FNDC1Q4ZHG4 1894 aaPredicted RBP8.09□□□□□ -1.11
LINC01049-201ENST00000426840 LINC01553A4QN01 128 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 TBKBP1A7MCY6 615 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 POM121CA8CG34 1229 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 GOLGA6L22H0YM25 854 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 FAM189A1O60320 539 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 SMC2O95347 1197 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 CA3P07451 260 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 BMP6P22004 513 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 TAP1Q03518 808 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 CAMK4Q16566 473 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 ZNF568Q3ZCX4 644 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 PAN2Q504Q3 1202 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms