RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 SPTLC1O15269 473 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 ST8SIA5O15466 376 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 XPOTO43592 962 aaKnown RBP9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 FGFR1P11362 822 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 MLH1P40692 756 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 FAM117BQ6P1L5 589 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 CD302Q8IX05 232 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 C12orf56Q8IXR9 622 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 SYCP3Q8IZU3 236 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 TRIML1Q8N9V2 468 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 RNF169Q8NCN4 708 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 ZNF507Q8TCN5 953 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 HELQQ8TDG4 1101 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 STAMQ92783 540 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 SMARCE1Q969G3 411 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 SNX27Q96L92 541 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 UROC1Q96N76 676 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 CASD1Q96PB1 797 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 TCHPQ9BT92 498 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 GBP3Q9H0R5 595 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 BLZF1Q9H2G9 400 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 PLEKHA5Q9HAU0 1116 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 SLC38A7Q9NVC3 462 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 LMCD1Q9NZU5 365 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 CNTN3Q9P232 1028 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 LZTS1Q9Y250 596 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 PCDHB12Q9Y5F1 795 aa9.77□□□□□ -0.85
TPM3P4-201ENST00000425942 VWA8A3KMH1 1905 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 A0A0B4J269 797 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 LCHNA4D1U4 455 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 ARL5CA6NH57 179 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 FAM189A1O60320 539 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 OFD1O75665 1012 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 CLTAP09496 248 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 LINC00271P0C7V0 271 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 CCNYL3P0C7X3 344 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 MYBP10242 640 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 CTNNB1P35222 781 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 MATR3P43243 847 aaKnown RBP eCLIP9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 CASP5P51878 434 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 RNASELQ05823 741 aaKnown RBP9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 PPP2R3AQ06190 1150 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 DSC1Q08554 894 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 STIM1Q13586 685 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 NFIL3Q16649 462 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 PTPRNQ16849 979 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 PAN2Q504Q3 1202 aaKnown RBP9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 ZC2HC1CQ53FD0 456 aaPredicted RBP9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 EEF1DP3Q658K8 133 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 ZNF787Q6DD87 383 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 ARMCX5Q6P1M9 558 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 TMCO2Q7Z6W1 182 aaPredicted RBP9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 NT5DC4Q86YG4 428 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 GRAMD1CQ8IYS0 662 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 GUF1Q8N442 669 aaKnown RBP9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 KIAA0895Q8NCT3 520 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 POMGNT1Q8WZA1 660 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 ZNF558Q96NG5 402 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 ACAP3Q96P50 834 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 MSTO1Q9BUK6 570 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 KIAA1586Q9HCI6 787 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 POLD4Q9HCU8 107 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 TYW1Q9NV66 732 aaKnown RBP9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 TBC1D13Q9NVG8 400 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 DERAQ9Y315 318 aa9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 MRPL42Q9Y6G3 142 aaKnown RBP9.76□□□□□ -0.85
TPM3P4-201ENST00000425942 TTC24A2A3L6 582 aaPredicted RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 GADD45BO75293 160 aaPredicted RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 IL18RAPO95256 599 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 THP07101 528 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 ADRB2P07550 413 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 PAX3P23760 479 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 BMPR1AP36894 532 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 PLCB3Q01970 1234 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 PNOCQ13519 176 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 MYBPC2Q14324 1141 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 PTPROQ16827 1216 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 KNOP1Q1ED39 458 aaKnown RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 EPC2Q52LR7 807 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 TIGD5Q53EQ6 642 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 XKR4Q5GH76 650 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 ZNF658Q5TYW1 1059 aaPredicted RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 SLC39A4Q6P5W5 647 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 FOXR2Q6PJQ5 311 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 CDR2LQ86X02 465 aaPredicted RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 SLC9A9Q8IVB4 645 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 TMEM192Q8IY95 271 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 COLGALT1Q8NBJ5 622 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 SCFD1Q8WVM8 642 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 LPPQ93052 612 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 FAM193BQ96PV7 902 aaPredicted RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 GAS2L1Q99501 681 aaPredicted RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 TTYH1Q9H313 450 aaPredicted RBP9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 ASB7Q9H672 318 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 CWH43Q9H720 699 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 SNTG2Q9NY99 539 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 TBC1D7Q9P0N9 293 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 PARP2Q9UGN5 583 aa9.75□□□□□ -0.85
TPM3P4-201ENST00000425942 AGO2Q9UKV8 859 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms