RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 OPHN1O60890 802 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 CHN2P52757 468 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 CD69Q07108 199 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 PABPC4Q13310 644 aaKnown RBP eCLIP3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 FHL3Q13643 280 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 KRT81Q14533 505 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 ARHGAP44Q17R89 818 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 ZNF628Q5EBL2 1059 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 CDCA2Q69YH5 1023 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 ZNF782Q6ZMW2 699 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 NEK8Q86SG6 692 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 EXOC8Q8IYI6 725 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 NXPE1Q8N323 547 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 PPP1R14CQ8TAE6 165 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 RTF1Q92541 710 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 PTCD3Q96EY7 689 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 PCIF1Q9H4Z3 704 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 TMEM74BQ9NUR3 256 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 KLHL11Q9NVR0 708 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 B4GALT6Q9UBX8 382 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 SBNO2Q9Y2G9 1366 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 NOTCH4Q99466 2003 aa3.32□□□□□ -1.88
R3HDM1-205ENST00000425804 ZMYM3Q14202 1370 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 ZNF891A8MT65 544 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 H7C1D1 291 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 APOL3O95236 402 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 CLEC2LP0C7M8 214 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 ATP2A2P16615 1042 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 MT3P25713 68 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 EPHB2P29323 1055 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 NR4A2P43354 598 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 ANAPC15P60006 121 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 APBA1Q02410 837 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 TFF2Q03403 129 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 LAMB3Q13751 1172 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 NFE2L2Q16236 605 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 PTPROQ16827 1216 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 TKFCQ3LXA3 575 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 CCDC144BQ3MJ40 725 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 EGFLAMQ63HQ2 1017 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 RHOT2Q8IXI1 618 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 MSL3Q8N5Y2 521 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 RBMXL3Q8N7X1 1067 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 ZCRB1Q8TBF4 217 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 HMCESQ96FZ2 354 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 PHACTR3Q96KR7 559 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 ZSWIM1Q9BR11 485 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 NOL10Q9BSC4 688 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 MYL10Q9BUA6 226 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 MS4A5Q9H3V2 200 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 POFUT1Q9H488 388 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 GALNT9Q9HCQ5 603 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 CABP5Q9NP86 173 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 OXSMQ9NWU1 459 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 MAGEC2Q9UBF1 373 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 CD2APQ9Y5K6 639 aa3.31□□□□□ -1.88
R3HDM1-205ENST00000425804 DRGXA6NNA5 263 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 HMGB1P1B2RPK0 211 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 MAFGO15525 162 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 KPNA6O60684 536 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 PRPF6O94906 941 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 LY86O95711 162 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 TOP3BO95985 862 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 CYP17A1P05093 508 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 LINC00205P59089 165 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 CXADRP78310 365 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 ADCY2Q08462 1091 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 ZNF174Q15697 407 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 CFAP100Q494V2 611 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 HSP90AB2PQ58FF8 381 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 KANSL1Q7Z3B3 1105 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 MORC4Q8TE76 937 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 MRFAP1L1Q96HT8 127 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 BOD1Q96IK1 185 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 HIST1H2AHQ96KK5 128 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 HIST1H2AJQ99878 128 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 BRINP2Q9C0B6 783 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 SEMA4CQ9C0C4 833 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 SPRTNQ9H040 489 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 ZMAT4Q9H898 229 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 PRDM16Q9HAZ2 1276 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 TOMM22Q9NS69 142 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 TMEM260Q9NX78 707 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 TBX22Q9Y458 520 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 SMARCA4P51532 1647 aa3.3□□□□□ -1.88
R3HDM1-205ENST00000425804 ELL2O00472 640 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 ORC4O43929 436 aa3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 PEX1O43933 1283 aa3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 SOX10P56693 466 aa3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 PCBP1Q15365 356 aaKnown RBP eCLIP3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 EPHA7Q15375 998 aa3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 RNF187Q5TA31 235 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 TMED8Q6PL24 325 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 UBE2R2Q712K3 238 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 TAS1R1Q7RTX1 841 aa3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 YTHDF3Q7Z739 585 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 THNSL2Q86YJ6 484 aa3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 LNX2Q8N448 690 aa3.29□□□□□ -1.88
R3HDM1-205ENST00000425804 CHTF18Q8WVB6 975 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms