RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 HDAC6Q9UBN7 1215 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 SRRDQ9UH36 339 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 SALL4Q9UJQ4 1053 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 ANO9A1A5B4 782 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 MACROD2A1Z1Q3 448 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 DARSP14868 501 aaKnown RBP16.37■□□□□ 0.21
ACTB-204ENST00000425660 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 TRIM32Q13049 653 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 NCOA4Q13772 614 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 GLYCTKQ8IVS8 523 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 NME8Q8N427 588 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 C7orf31Q8N865 590 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 EPS8L1Q8TE68 723 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 NOCTQ9UK39 431 aaKnown RBP16.37■□□□□ 0.21
ACTB-204ENST00000425660 CAPN6Q9Y6Q1 641 aa16.37■□□□□ 0.21
ACTB-204ENST00000425660 TULP1O00294 542 aaPredicted RBP16.36■□□□□ 0.21
ACTB-204ENST00000425660 TRPA1O75762 1119 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 SLU7O95391 586 aaKnown RBP16.36■□□□□ 0.21
ACTB-204ENST00000425660 PGK1P00558 417 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 ASS1P00966 412 aaKnown RBP16.36■□□□□ 0.21
ACTB-204ENST00000425660 STAG3L1P0CL83 205 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 EIF4BP23588 611 aaKnown RBP16.36■□□□□ 0.21
ACTB-204ENST00000425660 HOXD10P28358 340 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 HOXA11P31270 313 aaPredicted RBP16.36■□□□□ 0.21
ACTB-204ENST00000425660 AMPD2Q01433 879 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 MAP3K21Q5TCX8 1036 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 EFCAB13Q8IY85 973 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 TMEM192Q8IY95 271 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 DNAJB3Q8WWF6 145 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 CPB2Q96IY4 423 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 AGPAT1Q99943 283 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 PACSIN1Q9BY11 444 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 MTMR12Q9C0I1 747 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 ASB7Q9H672 318 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 RPF1Q9H9Y2 349 aaKnown RBP16.36■□□□□ 0.21
ACTB-204ENST00000425660 APOBEC3GQ9HC16 384 aaKnown RBP16.36■□□□□ 0.21
ACTB-204ENST00000425660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.36■□□□□ 0.216e-9■■■■■ 38.9
ACTB-204ENST00000425660 BRCA2P51587 3418 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 DNAH12Q6ZR08 3092 aa16.36■□□□□ 0.21
ACTB-204ENST00000425660 MEFVO15553 781 aaPredicted RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 GNRH1P01148 92 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 CXCL8P10145 99 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 TAF2Q6P1X5 1199 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 PPP1R13LQ8WUF5 828 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 CDHR5Q9HBB8 845 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 SCN10AQ9Y5Y9 1956 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 CYP26A1O43174 497 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 TACC1O75410 805 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 CST3P01034 146 aaPredicted RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 TBXAS1P24557 533 aaPredicted RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 OSTNP61366 133 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 NOP14P78316 857 aaKnown RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 ZNF200P98182 395 aaPredicted RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 TMEM62Q0P6H9 643 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 CUL2Q13617 745 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 DCAF4L1Q3SXM0 396 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 PAPD7Q5XG87 772 aaKnown RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 CCSAPQ6IQ19 270 aaPredicted RBP16.35■□□□□ 0.21
ACTB-204ENST00000425660 KLHDC9Q8NEP7 349 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 NOX5Q96PH1 765 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 OSMRQ99650 979 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 ARID3AQ99856 593 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 ADPGKQ9BRR6 497 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 XPNPEP3Q9NQH7 507 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 GTF2IRD1Q9UHL9 959 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 CNTN6Q9UQ52 1028 aa16.35■□□□□ 0.21
ACTB-204ENST00000425660 A0A0A6YYK5 440 aaPredicted RBP16.34■□□□□ 0.21
ACTB-204ENST00000425660 DYNC1I1O14576 645 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 PHACTR2O75167 634 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 SGPL1O95470 568 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 HMGCRP04035 888 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 H2AFZP0C0S5 128 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 ELNP15502 786 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 CYP11B1P15538 503 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 ACO1P21399 889 aaKnown RBP16.34■□□□□ 0.21
ACTB-204ENST00000425660 TNFAIP3P21580 790 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 CCND3P30281 292 aaPredicted RBP16.34■□□□□ 0.21
ACTB-204ENST00000425660 AXLP30530 894 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 NCBP1Q09161 790 aaKnown RBP16.34■□□□□ 0.21
ACTB-204ENST00000425660 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 CXCL17Q6UXB2 119 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 H2AFVQ71UI9 128 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 NOP9Q86U38 636 aaKnown RBP16.34■□□□□ 0.21
ACTB-204ENST00000425660 SLC47A2Q86VL8 602 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 SESTD1Q86VW0 696 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 PXYLP1Q8TE99 480 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 SLC20A1Q8WUM9 679 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 DHX38Q92620 1227 aaKnown RBP16.34■□□□□ 0.21
ACTB-204ENST00000425660 ALS2CR12Q96Q35 445 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 IMPG2Q9BZV3 1241 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 CDC23Q9UJX2 597 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 JRKLQ9Y4A0 524 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 NUB1Q9Y5A7 615 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
ACTB-204ENST00000425660 MOCS3O95396 460 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 TMEM191BP0C7N4 346 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 USP8P40818 1118 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms