RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 MRPL4Q9BYD3 311 aaKnown RBP17.73■□□□□ 0.43
COL18A1-205ENST00000423214 CDT1Q9H211 546 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 GOLGA2P5Q9HBQ8 144 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 DNM3Q9UQ16 869 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 CDY1Q9Y6F8 540 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 TCHHQ07283 1943 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 CACNA1IQ9P0X4 2223 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 LAD1O00515 517 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 HIP1RO75146 1068 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 FGFR3P22607 806 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 TKTP29401 623 aaKnown RBP17.72■□□□□ 0.43
COL18A1-205ENST00000423214 GRM5P41594 1212 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 NPTX2P47972 431 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 OSTNP61366 133 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 RAB33AQ14088 237 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 SPECC1Q5M775 1068 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 DCLRE1AQ6PJP8 1040 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 ANKS3Q6ZW76 656 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 CEP120Q8N960 986 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 DDX27Q96GQ7 796 aaKnown RBP17.72■□□□□ 0.43
COL18A1-205ENST00000423214 KIF2CQ99661 725 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 KMT5AQ9NQR1 393 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 SLC2A4RGQ9NR83 387 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 SLC38A7Q9NVC3 462 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 PCDHB6Q9Y5E3 794 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 GVINP1Q7Z2Y8 2422 aa17.72■□□□□ 0.43
COL18A1-205ENST00000423214 TICRRQ7Z2Z1 1910 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 E9PMD0 336 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 POU2F2P09086 479 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 U2AF2P26368 475 aaKnown RBP eCLIP17.71■□□□□ 0.43
COL18A1-205ENST00000423214 UPP1Q16831 310 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 UVSSAQ2YD98 709 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 PABPC1LQ4VXU2 614 aaKnown RBP17.71■□□□□ 0.43
COL18A1-205ENST00000423214 PHLDB3Q6NSJ2 640 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 PARM1Q6UWI2 310 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 C4orf32Q8N8J7 132 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 FGF13Q92913 245 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 FGF14Q92915 247 aa17.71■□□□□ 0.43
COL18A1-205ENST00000423214 ACO2Q99798 780 aaKnown RBP17.71■□□□□ 0.43
COL18A1-205ENST00000423214 COL4A3Q01955 1670 aa17.71■□□□□ 0.42
COL18A1-205ENST00000423214 SMIM28A0A1B0GU29 152 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 PP2D1A8MPX8 630 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 I3L4J1 428 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 DCNP07585 359 aaKnown RBP17.7■□□□□ 0.42
COL18A1-205ENST00000423214 HARSP12081 509 aaKnown RBP17.7■□□□□ 0.42
COL18A1-205ENST00000423214 BRCC3P46736 316 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
COL18A1-205ENST00000423214 DTHD1Q6ZMT9 781 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 C3orf58Q8NDZ4 430 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 ITFG1Q8TB96 612 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 SHDQ96IW2 340 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 SNX27Q96L92 541 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 TCHPQ9BT92 498 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 TMEM134Q9H6X4 195 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 HCFC1R1Q9NWW0 138 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 ARHGAP28Q9P2N2 729 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 SIT1Q9Y3P8 196 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
COL18A1-205ENST00000423214 PODXLO00592 558 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 MCF2P10911 925 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 PRPHP41219 470 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 STRN3Q13033 797 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 MCTP1Q6DN14 999 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 MPZL3Q6UWV2 235 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 RTL10Q7L3V2 364 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 DAW1Q8N136 415 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 ADSSL1Q8N142 457 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 PJA1Q8NG27 643 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 ING5Q8WYH8 240 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 ACAP3Q96P50 834 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 TIPINQ9BVW5 301 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 TARS2Q9BW92 718 aaKnown RBP17.69■□□□□ 0.42
COL18A1-205ENST00000423214 C17orf75Q9HAS0 396 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 ANKFY1Q9P2R3 1169 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 RBM19Q9Y4C8 960 aaKnown RBP17.69■□□□□ 0.42
COL18A1-205ENST00000423214 NUB1Q9Y5A7 615 aa17.69■□□□□ 0.42
COL18A1-205ENST00000423214 TSC2P49815 1807 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 PRRG1O14668 218 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 SLC16A4O15374 487 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 LRG1P02750 347 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 ELF1P32519 619 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 TOB1P50616 345 aaPredicted RBP17.68■□□□□ 0.42
COL18A1-205ENST00000423214 GPC5P78333 572 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 ROR1Q01973 937 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 SOX4Q06945 474 aaPredicted RBP17.68■□□□□ 0.42
COL18A1-205ENST00000423214 RINT1Q6NUQ1 792 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 ZC3H14Q6PJT7 736 aaKnown RBP17.68■□□□□ 0.42
COL18A1-205ENST00000423214 NPAS3Q8IXF0 933 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 KCNG4Q8TDN1 519 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 KXD1Q9BQD3 176 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 FOXQ1Q9C009 403 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 KCNH3Q9ULD8 1083 aa17.68■□□□□ 0.42
COL18A1-205ENST00000423214 MRPS23Q9Y3D9 190 aaKnown RBP17.68■□□□□ 0.42
COL18A1-205ENST00000423214 CDC25AP30304 524 aa17.67■□□□□ 0.42
COL18A1-205ENST00000423214 ARPP19P56211 112 aa17.67■□□□□ 0.42
COL18A1-205ENST00000423214 PFKPQ01813 784 aa17.67■□□□□ 0.42
COL18A1-205ENST00000423214 MAPK7Q13164 816 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms