RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 JADE1Q6IE81 842 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 TRAPPC11Q7Z392 1133 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 EFCAB13Q8IY85 973 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 RPUSD2Q8IZ73 545 aaKnown RBP23.28■■□□□ 1.32
ABCF3-202ENST00000421340 OR5B17Q8NGF7 314 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 HTATIP2Q9BUP3 242 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 FBXL5Q9UKA1 691 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 PTPRJQ12913 1337 aa23.28■■□□□ 1.32
ABCF3-202ENST00000421340 INPPL1O15357 1258 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 ZC3H11AO75152 810 aaKnown RBP eCLIP23.27■■□□□ 1.32
ABCF3-202ENST00000421340 TMEM191BP0C7N4 346 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 TFAMQ00059 246 aaKnown RBP23.27■■□□□ 1.32
ABCF3-202ENST00000421340 TMEM132DQ14C87 1099 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 TDRD10Q5VZ19 366 aaKnown RBP23.27■■□□□ 1.32
ABCF3-202ENST00000421340 DPY19L2P1Q6NXN4 242 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 CNKSR3Q6P9H4 555 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 AGMOQ6ZNB7 445 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 NEK11Q8NG66 645 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 LINC01599Q8WXQ3 324 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 PCMTD1Q96MG8 357 aaPredicted RBP23.27■■□□□ 1.32
ABCF3-202ENST00000421340 CRACR2AQ9BSW2 395 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 MMRN2Q9H8L6 949 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 PRDM5Q9NQX1 630 aaPredicted RBP23.27■■□□□ 1.32
ABCF3-202ENST00000421340 RAB20Q9NX57 234 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 GCNT4Q9P109 453 aa23.27■■□□□ 1.32
ABCF3-202ENST00000421340 SMIM28A0A1B0GU29 152 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 A0A1W2PQJ5 194 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 XPOTO43592 962 aaKnown RBP23.26■■□□□ 1.31
ABCF3-202ENST00000421340 ATF7P17544 494 aaPredicted RBP23.26■■□□□ 1.31
ABCF3-202ENST00000421340 SLC9A1P19634 815 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 CYP3A5P20815 502 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 ITGB8P26012 769 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 LMBRD2Q68DH5 695 aaPredicted RBP23.26■■□□□ 1.31
ABCF3-202ENST00000421340 SMYD5Q6GMV2 418 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 TRIM65Q6PJ69 517 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 PPFIBP1Q86W92 1011 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 APOL6Q9BWW8 343 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 TTYH3Q9C0H2 523 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 INTS2Q9H0H0 1204 aaKnown RBP23.26■■□□□ 1.31
ABCF3-202ENST00000421340 PRKAG2Q9UGJ0 569 aa23.26■■□□□ 1.31
ABCF3-202ENST00000421340 NFICP08651 508 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 TPM1P09493 284 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 TRIM21P19474 475 aaKnown RBP23.25■■□□□ 1.31
ABCF3-202ENST00000421340 BIRC3Q13489 604 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 IKBKEQ14164 716 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 KLHDC7AQ5VTJ3 777 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 SPC24Q8NBT2 197 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 TAS1R2Q8TE23 839 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 RSPH1Q8WYR4 309 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 VWCEQ96DN2 955 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 KIF12Q96FN5 646 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 LSM14BQ9BX40 385 aaKnown RBP23.25■■□□□ 1.31
ABCF3-202ENST00000421340 MTMR12Q9C0I1 747 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 TMEM161AQ9NX61 479 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 ITGA11Q9UKX5 1188 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 CAPN11Q9UMQ6 739 aa23.25■■□□□ 1.31
ABCF3-202ENST00000421340 UBQLN1Q9UMX0 589 aaKnown RBP23.25■■□□□ 1.31
ABCF3-202ENST00000421340 TULP1O00294 542 aaPredicted RBP23.24■■□□□ 1.31
ABCF3-202ENST00000421340 EFCAB14O75071 495 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 PHACTR2O75167 634 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 NOL4O94818 638 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 VNN1O95497 513 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 RFX1P22670 979 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 KLK7P49862 253 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 GSDMDP57764 484 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 PTPN21Q16825 1174 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 DEFB128Q7Z7B8 93 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 BEST2Q8NFU1 509 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 TAF4BQ92750 862 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 FAM81BQ96LP2 452 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 ZMAT2Q96NC0 199 aaKnown RBP23.24■■□□□ 1.31
ABCF3-202ENST00000421340 RSAD1Q9HA92 442 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 SIX2Q9NPC8 291 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 SLC38A7Q9NVC3 462 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 TANC1Q9C0D5 1861 aa23.24■■□□□ 1.31
ABCF3-202ENST00000421340 ABHD14A-ACY1A0A1B0GW23 586 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 ARL5CA6NH57 179 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 HLA-DRAP01903 254 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 GYPCP04921 128 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 ATICP31939 592 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 NCOA4Q13772 614 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 SGSM1Q2NKQ1 1148 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 CRIPAKQ8N1N5 446 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 GSTCDQ8NEC7 633 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 CXorf38Q8TB03 319 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 SEMA4DQ92854 862 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 FAXDC2Q96IV6 333 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 PPP1R10Q96QC0 940 aaKnown RBP23.23■■□□□ 1.31
ABCF3-202ENST00000421340 GANQ9H2C0 597 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 FAM207AQ9NSI2 230 aaPredicted RBP23.23■■□□□ 1.31
ABCF3-202ENST00000421340 DPP3Q9NY33 737 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 KLK14Q9P0G3 267 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 CEP72Q9P209 647 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 APEX2Q9UBZ4 518 aa23.23■■□□□ 1.31
ABCF3-202ENST00000421340 PTGESO14684 152 aa23.22■■□□□ 1.31
ABCF3-202ENST00000421340 CSF2RAP15509 400 aa23.22■■□□□ 1.31
ABCF3-202ENST00000421340 RBP5P82980 135 aa23.22■■□□□ 1.31
ABCF3-202ENST00000421340 TRPC3Q13507 836 aa23.22■■□□□ 1.31
ABCF3-202ENST00000421340 TCTN1Q2MV58 587 aa23.22■■□□□ 1.31
ABCF3-202ENST00000421340 WDR44Q5JSH3 913 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms