RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TUSC3Q13454 348 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 PON2Q15165 354 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 FAM171A1Q5VUB5 890 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-206ENST00000420746 CCNI2Q6ZMN8 369 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-206ENST00000420746 PDZD4Q76G19 769 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-206ENST00000420746 CYP2U1Q7Z449 544 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 HEATR3Q7Z4Q2 680 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 YAF2Q8IY57 180 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 ZNF654Q8IZM8 581 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 ADAMTS14Q8WXS8 1223 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 PGBD1Q96JS3 809 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 HNRNPABQ99729 332 aaKnown RBP10.07□□□□□ -0.8
TRIM39-206ENST00000420746 DISC1Q9NRI5 854 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 BACE2Q9Y5Z0 518 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 APC2O95996 2303 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 NCANO14594 1321 aa10.07□□□□□ -0.8
TRIM39-206ENST00000420746 ARHGAP6O43182 974 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 VIPR2P41587 438 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 SOX9P48436 509 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 JAK3P52333 1124 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 UGCGQ16739 394 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 MTERF2Q49AM1 385 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 XKR3Q5GH77 459 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 CYP4A22Q5TCH4 519 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 PKN3Q6P5Z2 889 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 NOTUMQ6P988 496 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 CEP57Q86XR8 500 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 ZSCAN18Q8TBC5 510 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-206ENST00000420746 IGDCC4Q8TDY8 1250 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 TCEAL4Q96EI5 215 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 ZSWIM3Q96MP5 696 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 CORO1BQ9BR76 489 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 MTA3Q9BTC8 594 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 CSRNP2Q9H175 543 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 COL4A3BPQ9Y5P4 624 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 PCNX2A6NKB5 2137 aa10.06□□□□□ -0.8
TRIM39-206ENST00000420746 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 ASCC3Q8N3C0 2202 aaKnown RBP10.05□□□□□ -0.8
TRIM39-206ENST00000420746 PATE3B3GLJ2 98 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 hCG_1984214I3L0E3 225 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 HIP1O00291 1037 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 ERLIN2O94905 339 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 KIF4AO95239 1232 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 APBB3O95704 486 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 CCR2P41597 374 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 DPP6P42658 865 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 ADCY7P51828 1080 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 EPHA5P54756 1037 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 ARHGAP29Q52LW3 1261 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 CWC27Q6UX04 472 aaKnown RBP10.05□□□□□ -0.8
TRIM39-206ENST00000420746 HAUS6Q7Z4H7 955 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 RALYLQ86SE5 291 aaKnown RBP10.05□□□□□ -0.8
TRIM39-206ENST00000420746 KSR1Q8IVT5 923 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 ZNF713Q8N859 430 aaPredicted RBP10.05□□□□□ -0.8
TRIM39-206ENST00000420746 RDM1Q8NG50 284 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 ZNF461Q8TAF7 563 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 MDM1Q8TC05 714 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 TMEM209Q96SK2 561 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 NUSAP1Q9BXS6 441 aaKnown RBP10.05□□□□□ -0.8
TRIM39-206ENST00000420746 EIF2AQ9BY44 585 aaKnown RBP10.05□□□□□ -0.8
TRIM39-206ENST00000420746 MINDY3Q9H8M7 445 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
TRIM39-206ENST00000420746 SEPT9Q9UHD8 586 aaPredicted RBP10.05□□□□□ -0.8
TRIM39-206ENST00000420746 CDY1Q9Y6F8 540 aa10.05□□□□□ -0.8
TRIM39-206ENST00000420746 MOSPD3O75425 235 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 STBD1O95210 358 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 CALM1P0DP23 149 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 CALM2P0DP24 149 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 CALM3P0DP25 149 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 ATF2P15336 505 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 FGFR3P22607 806 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 GBP1P32455 592 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 NAPAP54920 295 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 NCBP1Q09161 790 aaKnown RBP10.04□□□□□ -0.8
TRIM39-206ENST00000420746 PTPAQ15257 358 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 TRIM61Q5EBN2 209 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 WWC2Q6AWC2 1192 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 IQCEQ6IPM2 695 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 SLC8B1Q6J4K2 584 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 ANKS3Q6ZW76 656 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 EXOC8Q8IYI6 725 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 TCEAL8Q8IYN2 117 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 ELMOD1Q8N336 334 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 NCOA7Q8NI08 942 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 RILPL2Q969X0 211 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 RIT2Q99578 217 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 CLMPQ9H6B4 373 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 DIAPH3Q9NSV4 1193 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 OBP2AQ9NY56 170 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 HES2Q9Y543 173 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 PPME1Q9Y570 386 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 ASXL3Q9C0F0 2248 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 EML5Q05BV3 1969 aa10.04□□□□□ -0.8
TRIM39-206ENST00000420746 PDCD11Q14690 1871 aaKnown RBP10.04□□□□□ -0.8
TRIM39-206ENST00000420746 TDRD15B5MCY1 1934 aaKnown RBP10.03□□□□□ -0.8
TRIM39-206ENST00000420746 TMEM189-UBE2V1I3L0A0 370 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms