RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 RESTQ13127 1097 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 KARSQ15046 597 aaKnown RBP12.1□□□□□ -0.47
SSBP3-206ENST00000420121 PSMD5Q16401 504 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 IER5LQ5T953 404 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 MPZL3Q6UWV2 235 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 RSPO2Q6UXX9 243 aaPredicted RBP12.1□□□□□ -0.47
SSBP3-206ENST00000420121 CYP26C1Q6V0L0 522 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 USP49Q70CQ1 688 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 TMEM130Q8N3G9 435 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 FBXL6Q8N531 539 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 MFSD14AQ96MC6 490 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 FIZ1Q96SL8 496 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 REEP2Q9BRK0 252 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 KCNH6Q9H252 994 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 PLEKHA4Q9H4M7 779 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 CLIC4Q9Y696 253 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 CLUHO75153 1309 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 CACNA1HO95180 2353 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 TSC2P49815 1807 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 I3L4J1 428 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 TOM1L1O75674 476 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 ZMYND10O75800 440 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 BMP15O95972 392 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 SYT1P21579 422 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 BRCC3P46736 316 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 VCPP55072 806 aaKnown RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 MCL1Q07820 350 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 ELAVL2Q12926 359 aaKnown RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 MCM6Q14566 821 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 SLC10A6Q3KNW5 377 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 SEZ6Q53EL9 994 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 DCLRE1AQ6PJP8 1040 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 ZPBP2Q6X784 338 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 GPBP1Q86WP2 473 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 UBALD2Q8IYN6 164 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 PRSS33Q8NF86 280 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 SMG7Q92540 1137 aaKnown RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 CDK5RAP3Q96JB5 506 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 UROC1Q96N76 676 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 MYADMQ96S97 322 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-206ENST00000420121 ZDHHC7Q9NXF8 308 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 MTRRQ9UBK8 725 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 ODF2LQ9ULJ1 636 aa12.09□□□□□ -0.47
SSBP3-206ENST00000420121 FAM189A1O60320 539 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 B3GAT3O94766 335 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 TKTP29401 623 aaKnown RBP12.08□□□□□ -0.48
SSBP3-206ENST00000420121 UBA7P41226 1012 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 YARSP54577 528 aaKnown RBP12.08□□□□□ -0.48
SSBP3-206ENST00000420121 NHLH1Q02575 133 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 CREMQ03060 361 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 RAB33AQ14088 237 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 NOLC1Q14978 699 aaKnown RBP eCLIP12.08□□□□□ -0.48
SSBP3-206ENST00000420121 OTOP3Q7RTS5 596 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 HAUS6Q7Z4H7 955 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 RAD54LQ92698 747 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 C18orf25Q96B23 403 aaPredicted RBP12.08□□□□□ -0.48
SSBP3-206ENST00000420121 CALML4Q96GE6 196 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 INTS4Q96HW7 963 aaKnown RBP12.08□□□□□ -0.48
SSBP3-206ENST00000420121 EPSTI1Q96J88 318 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 ACAP3Q96P50 834 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 CCSER1Q9C0I3 900 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 ANKFY1Q9P2R3 1169 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 DPP7Q9UHL4 492 aa12.08□□□□□ -0.48
SSBP3-206ENST00000420121 FBXO2Q9UK22 296 aaPredicted RBP12.08□□□□□ -0.48
SSBP3-206ENST00000420121 TTC26A0AVF1 554 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 PODXLO00592 558 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 TBC1D4O60343 1298 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 PIGRP01833 764 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
SSBP3-206ENST00000420121 PDCP20941 246 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 OR1D2P34982 312 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 SCN1AP35498 2009 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 TNFSF9P41273 254 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 SMTNP53814 917 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 STRN3Q13033 797 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 DHX8Q14562 1220 aaKnown RBP12.07□□□□□ -0.48
SSBP3-206ENST00000420121 ZBTB6Q15916 424 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 SPECC1Q5M775 1068 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 ZBTB41Q5SVQ8 909 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 SLC39A4Q6P5W5 647 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 ACSF2Q96CM8 615 aaPredicted RBP12.07□□□□□ -0.48
SSBP3-206ENST00000420121 TCHPQ9BT92 498 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 KCNK12Q9HB15 430 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 LARSQ9P2J5 1176 aaKnown RBP12.07□□□□□ -0.48
SSBP3-206ENST00000420121 EPS15L1Q9UBC2 864 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 KCNG1Q9UIX4 513 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 MTMR6Q9Y217 621 aa12.07□□□□□ -0.48
SSBP3-206ENST00000420121 C8AP07357 584 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms