RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PAK2Q13177 524 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZBTB6Q15916 424 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 LRRC8DQ7L1W4 858 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 ENOSF1Q7L5Y1 443 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 HACE1Q8IYU2 909 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 CEP120Q8N960 986 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 CACTINQ8WUQ7 758 aaKnown RBP15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 INTS2Q9H0H0 1204 aaKnown RBP15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 VRTNQ9H8Y1 702 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 ABHD10Q9NUJ1 306 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 SZT2Q5T011 3432 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 INPPL1O15357 1258 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 NPTXRO95502 500 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 CXCL10P02778 98 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 CXCL8P10145 99 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZSCAN20P17040 1043 aaPredicted RBP15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 SLC9A1P19634 815 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 KRT9P35527 623 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 WNT7BP56706 349 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 FAM189BP81408 668 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 GCNT1Q02742 428 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 FAAP100Q0VG06 881 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 MBTPS1Q14703 1052 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 RSPH1Q8WYR4 309 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 TAF4BQ92750 862 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 APBB2Q92870 758 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 SNX27Q96L92 541 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 POP1Q99575 1024 aaKnown RBP15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 CRACR2AQ9BSW2 395 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 EIF2AQ9BY44 585 aaKnown RBP15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 UBN1Q9NPG3 1134 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 FAM207AQ9NSI2 230 aaPredicted RBP15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 AIPL1Q9NZN9 384 aa15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZMYND8Q9ULU4 1186 aaPredicted RBP15.41■□□□□ 0.06
SHMT1P1-201ENST00000419974 PTPRJQ12913 1337 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 LACTBL1A8MY62 500 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 RNF225M0QZC1 329 aaPredicted RBP15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 EPHB6O15197 1021 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 NRDCO43847 1150 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 CTSHP09668 335 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 CYP3A5P20815 502 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 KLK7P49862 253 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 YARSP54577 528 aaKnown RBP15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 JAM2P57087 298 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 TDRD10Q5VZ19 366 aaKnown RBP15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRAPPC11Q7Z392 1133 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 CDR2LQ86X02 465 aaPredicted RBP15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 TMEM139Q8IV31 216 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 TMEM192Q8IY95 271 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 SMG8Q8ND04 991 aaKnown RBP15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 CXorf38Q8TB03 319 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 TAS1R2Q8TE23 839 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 LSM14BQ9BX40 385 aaKnown RBP15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 STK33Q9BYT3 514 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 RGS18Q9NS28 235 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 KCND1Q9NSA2 647 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 FAM105AQ9NUU6 356 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 TBX21Q9UL17 535 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 GIT1Q9Y2X7 761 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 IPPQ9Y573 584 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 PCDHB2Q9Y5E7 798 aa15.4■□□□□ 0.06
SHMT1P1-201ENST00000419974 EOMESO95936 686 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 GHRP10912 638 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 HARSP12081 509 aaKnown RBP15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 ANXA13P27216 316 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 CD52P31358 61 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 ATICP31939 592 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 RFC2P35250 354 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 MAGEA10P43363 369 aaPredicted RBP15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 CCZ1BP86790 482 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 CCZ1P86791 482 aaPredicted RBP15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 GPNMBQ14956 572 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 SEZ6Q53EL9 994 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 PLEKHG4Q58EX7 1191 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 TWF2Q6IBS0 349 aaKnown RBP15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 TMTC1Q8IUR5 882 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 EFCAB13Q8IY85 973 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 SEMA4DQ92854 862 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 ANKRD36BP1Q96IX9 119 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 PCMTD1Q96MG8 357 aaPredicted RBP15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 KCNF1Q9H3M0 494 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 C1orf112Q9NSG2 853 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 ITGA11Q9UKX5 1188 aa15.39■□□□□ 0.05
SHMT1P1-201ENST00000419974 VNN1O95497 513 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 ASS1P00966 412 aaKnown RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 TNNC2P02585 160 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 SYN1P17600 705 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 ATN1P54259 1190 aaPredicted RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 ADKP55263 362 aaKnown RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 POLR2FP61218 127 aaKnown RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 TLE2Q04725 743 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 NFX1Q12986 1120 aaKnown RBP15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 PTPN21Q16825 1174 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 SGSM1Q2NKQ1 1148 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 PHLDB3Q6NSJ2 640 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 PDXDC1Q6P996 788 aa15.38■□□□□ 0.05
SHMT1P1-201ENST00000419974 CACNA2D4Q7Z3S7 1137 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms