RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ADCY1Q08828 1119 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 DCAF4L1Q3SXM0 396 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 TTC19Q6DKK2 380 aaPredicted RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 SHC4Q6S5L8 630 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 KAZALD1Q96I82 304 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 REEP2Q9BRK0 252 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 TRIM9Q9C026 710 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 PPME1Q9Y570 386 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ORC6Q9Y5N6 252 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 BTAF1O14981 1849 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 NPHP3-ACAD11A0A0J9YXS1 232 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 DCDC2CA8MYV0 355 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 SLC1A1P43005 524 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ZNF280AP59817 542 aaPredicted RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 KSR1Q8IVT5 923 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 RAB42Q8N4Z0 105 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 MTMR14Q8NCE2 650 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ARRDC4Q8NCT1 418 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 WNK4Q96J92 1243 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 FGD4Q96M96 766 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 AGPAT1Q99943 283 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 KCNQ5Q9NR82 932 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 BFARQ9NZS9 450 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 PKD1L3Q7Z443 1732 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 KPNA7A9QM74 516 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 APOL1O14791 398 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ZMYND10O75800 440 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 SLCO1A2P46721 670 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 CTCFP49711 727 aaPredicted RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 ZNF746Q6NUN9 644 aaPredicted RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 IGSF9BQ9UPX0 1349 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 AP3B1O00203 1094 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 DFFAO00273 331 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 PNPLA4P41247 253 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 TPI1P60174 286 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 SP3Q02447 781 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 NCOA4Q13772 614 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 LMBRD2Q68DH5 695 aaPredicted RBP8.93□□□□□ -0.98
UBR4-206ENST00000419533 DDX53Q86TM3 631 aaKnown RBP8.93□□□□□ -0.98
UBR4-206ENST00000419533 PCSK9Q8NBP7 692 aaKnown RBP8.93□□□□□ -0.98
UBR4-206ENST00000419533 ASAP3Q8TDY4 903 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 C18orf8Q96DM3 657 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 EFHD1Q9BUP0 239 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 KCNH7Q9NS40 1196 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 COPEO14579 308 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 EIF3DO15371 548 aaKnown RBP eCLIP8.93□□□□□ -0.987e-8■■□□□ 11.9
UBR4-206ENST00000419533 RTN2O75298 545 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 ESRRBO95718 433 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 HSPA4LO95757 839 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 MX2P20592 715 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 TCF7P36402 384 aaPredicted RBP8.93□□□□□ -0.98
UBR4-206ENST00000419533 ACOT2P49753 483 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 LIG3P49916 1009 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 PRAMEP78395 509 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 TMEM62Q0P6H9 643 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 NR1H3Q13133 447 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 SNRNP35Q16560 246 aaKnown RBP8.93□□□□□ -0.98
UBR4-206ENST00000419533 TAAR1Q96RJ0 339 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 TRIM54Q9BYV2 358 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 IFNA8P32881 189 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 ACADSBP45954 432 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 CDH6P55285 790 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 RPS6P62753 249 aaKnown RBP8.93□□□□□ -0.98
UBR4-206ENST00000419533 ANKRD20A4Q4UJ75 823 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 ANKRD20A8PQ5CZ79 823 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 ZNF484Q5JVG2 852 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 ANKRD20A2Q5SQ80 823 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 ANKRD20A1Q5TYW2 823 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 PDXDC1Q6P996 788 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 SNX19Q92543 992 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 SUN2Q9UH99 717 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 RGPD2P0DJD1 1756 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 GRID2IPA4D2P6 1211 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 GPR182O15218 404 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 HOXA2O43364 376 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 NPM3O75607 178 aaKnown RBP8.93□□□□□ -0.98
UBR4-206ENST00000419533 CYP2C19P33261 490 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 OR1G1P47890 313 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 BFSP2Q13515 415 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 ARHGAP15Q53QZ3 475 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 EMBQ6PCB8 327 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 MIPOL1Q8TD10 442 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 RFFLQ8WZ73 363 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 SEPT5Q99719 369 aaPredicted RBP8.93□□□□□ -0.98
UBR4-206ENST00000419533 COLEC11Q9BWP8 271 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 FAM96AQ9H5X1 160 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 CPA4Q9UI42 421 aa8.93□□□□□ -0.98
UBR4-206ENST00000419533 CCDC151A5D8V7 595 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 KIF3CO14782 793 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 PSMD3O43242 534 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 CHRNA3P32297 505 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 IL1RL1Q01638 556 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 CACNB2Q08289 660 aaPredicted RBP8.92□□□□□ -0.98
UBR4-206ENST00000419533 NFIAQ12857 509 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 ANKRD40Q6AI12 368 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
UBR4-206ENST00000419533 FAM117BQ6P1L5 589 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 TAS2R42Q7RTR8 314 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 PDZD8Q8NEN9 1154 aa8.92□□□□□ -0.98
UBR4-206ENST00000419533 RMDN1Q96DB5 314 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms