RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 CXCL10P02778 98 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 RSPH10BP0C881 870 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 ZNF165P49910 485 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 SLC26A2P50443 739 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 IGBP1P78318 339 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 PLCB4Q15147 1175 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 INF2Q27J81 1249 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 TCTN1Q2MV58 587 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 Q4G0T1 1027 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 MARCH8Q5T0T0 291 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 FAM160B1Q5W0V3 765 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 ZNF746Q6NUN9 644 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-205ENST00000419378 MIS18BP1Q6P0N0 1132 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 TAF2Q6P1X5 1199 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 ABHD15Q6UXT9 468 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 CCDC81Q6ZN84 652 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 RUFY4Q6ZNE9 571 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 GK5Q6ZS86 529 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 PLPPR4Q7Z2D5 763 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 CCDC60Q8IWA6 550 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-205ENST00000419378 CCDC83Q8IWF9 413 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 SMAP1Q8IYB5 467 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-205ENST00000419378 SLC5A5Q92911 643 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 MBOAT7Q96N66 472 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 GUCD1Q96NT3 240 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 RIT2Q99578 217 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 TTYH1Q9H313 450 aaPredicted RBP7.8□□□□□ -1.16
HMGN1-205ENST00000419378 MTMR10Q9NXD2 777 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 TCEAL9Q9UHQ7 104 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 TUBE1Q9UJT0 475 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 GBF1Q92538 1859 aa7.8□□□□□ -1.16
HMGN1-205ENST00000419378 KAT6AQ92794 2004 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 IGSF9BQ9UPX0 1349 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 A0A0C4DFX4 3053 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 TMEM265A0A087WTH1 108 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 CYP3A7-CYP3A51PA0A087WV96 503 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 F8W735 103 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 SLC37A4O43826 429 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 GAS7O60861 476 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 ALX3O95076 343 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 SSBP05455 408 aaKnown RBP eCLIP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 DRD2P14416 443 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 INSRRP14616 1297 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 ATP2A2P16615 1042 aaKnown RBP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 CYP3A7P24462 503 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 KRT2P35908 639 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 ID3Q02535 119 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 CLCQ05315 142 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 RABEP1Q15276 862 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 RAB30Q15771 203 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 LETM2Q2VYF4 491 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 EARS2Q5JPH6 523 aaKnown RBP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 LRCH2Q5VUJ6 765 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 SWSAP1Q6NVH7 229 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 CNKSR3Q6P9H4 555 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 MOXD1Q6UVY6 613 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 PIK3AP1Q6ZUJ8 805 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 NEK8Q86SG6 692 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 TMEM130Q8N3G9 435 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 C12orf50Q8NA57 414 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 SMG8Q8ND04 991 aaKnown RBP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 ETNPPLQ8TBG4 499 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 ATP8B4Q8TF62 1192 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 CPLX3Q8WVH0 158 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 TRAPPC12Q8WVT3 735 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 UBXN4Q92575 508 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 TNPO1Q92973 898 aaKnown RBP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 GJA10Q969M2 543 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 TIFAQ96CG3 184 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 ZBTB10Q96DT7 871 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 SLC9A7Q96T83 725 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 TEKT3Q9BXF9 490 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 SEMA6BQ9H3T3 888 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 SUGCTQ9HAC7 445 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 UPF2Q9HAU5 1272 aaKnown RBP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 CYP4F12Q9HCS2 524 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 ZNF302Q9NR11 478 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 AP4E1Q9UPM8 1137 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 HIF3AQ9Y2N7 669 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 YBX2Q9Y2T7 364 aaKnown RBP7.79□□□□□ -1.16
HMGN1-205ENST00000419378 PCDHB14Q9Y5E9 798 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 PCDHA10Q9Y5I2 948 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 CORINQ9Y5Q5 1042 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 SIP14410 1827 aa7.79□□□□□ -1.16
HMGN1-205ENST00000419378 PTPRSQ13332 1948 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 TRANK1O15050 2925 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 PRAMEF27A3QJZ7 478 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 RRN3P2A6NIE6 340 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 WDR64B1ANS9 1081 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 CHMP2AO43633 222 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 PSMD10O75832 226 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 CHRNA1P02708 482 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 MMP1P03956 469 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 ADH5P11766 374 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 GCFC2P16383 781 aaKnown RBP7.78□□□□□ -1.16
HMGN1-205ENST00000419378 KCNJ6P48051 423 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 JAK3P52333 1124 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 RABGGTBP53611 331 aa7.78□□□□□ -1.16
HMGN1-205ENST00000419378 WDR5P61964 334 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms