RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 HAPLN2Q9GZV7 340 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 GOLGA2P5Q9HBQ8 144 aa18■□□□□ 0.47
LINC00404-201ENST00000418660 MEFVO15553 781 aaPredicted RBP17.99■□□□□ 0.47
LINC00404-201ENST00000418660 TRAPPC3O43617 180 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 PPP6R2O75170 966 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 RPL17P18621 184 aaKnown RBP17.99■□□□□ 0.47
LINC00404-201ENST00000418660 GTF2BQ00403 316 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 SOX4Q06945 474 aaPredicted RBP17.99■□□□□ 0.47
LINC00404-201ENST00000418660 SLC10A6Q3KNW5 377 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 SEZ6Q53EL9 994 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 LILRA6Q6PI73 481 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 CD300LGQ6UXG3 332 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.99■□□□□ 0.47
LINC00404-201ENST00000418660 C15orf39Q6ZRI6 1047 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 DYMQ7RTS9 669 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 LNX1Q8TBB1 728 aaPredicted RBP17.99■□□□□ 0.47
LINC00404-201ENST00000418660 ST6GALNAC4Q9H4F1 302 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 PLEKHA4Q9H4M7 779 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 PLEKHA5Q9HAU0 1116 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 TSHZ2Q9NRE2 1034 aa17.99■□□□□ 0.47
LINC00404-201ENST00000418660 TFIP11Q9UBB9 837 aaKnown RBP17.99■□□□□ 0.47
LINC00404-201ENST00000418660 MYMKA6NI61 221 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 PRR33A8MZF0 331 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 HNRNPDLO14979 420 aaKnown RBP17.98■□□□□ 0.47
LINC00404-201ENST00000418660 SPTLC2O15270 562 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 TGM5O43548 720 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 CLTAP09496 248 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 ZSCAN22P10073 491 aaPredicted RBP17.98■□□□□ 0.47
LINC00404-201ENST00000418660 FGFR3P22607 806 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 SP100P23497 879 aaPredicted RBP17.98■□□□□ 0.47
LINC00404-201ENST00000418660 IGFBP6P24592 240 aaPredicted RBP17.98■□□□□ 0.47
LINC00404-201ENST00000418660 NMT1P30419 496 aaKnown RBP17.98■□□□□ 0.47
LINC00404-201ENST00000418660 RPL9P32969 192 aaKnown RBP17.98■□□□□ 0.47
LINC00404-201ENST00000418660 PSMD5Q16401 504 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 KYAT1Q16773 422 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 CYP26C1Q6V0L0 522 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 MAP4K3Q8IVH8 894 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 GLYCTKQ8IVS8 523 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 C3orf58Q8NDZ4 430 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 DDX12PQ92771 950 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 EDAQ92838 391 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 CLSTN3Q9BQT9 956 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 RHOBTB2Q9BYZ6 727 aa17.98■□□□□ 0.47
LINC00404-201ENST00000418660 CCDC195A0A1B0GUA6 201 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 C2CD4DB7Z1M9 353 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 PODXLO00592 558 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 PAPLNO95428 1278 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 YEATS4O95619 227 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 SPATA31D3P0C874 917 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 STAT6P42226 847 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 FOXD4L5Q5VV16 416 aaPredicted RBP17.97■□□□□ 0.47
LINC00404-201ENST00000418660 SPATA31D4Q6ZUB0 917 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 FEZF2Q8TBJ5 459 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 FOXD4L4Q8WXT5 416 aaPredicted RBP17.97■□□□□ 0.47
LINC00404-201ENST00000418660 C18orf25Q96B23 403 aaPredicted RBP17.97■□□□□ 0.47
LINC00404-201ENST00000418660 DNAJC19Q96DA6 116 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 PANK2Q9BZ23 570 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 SEL1LQ9UBV2 794 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 USTQ9Y2C2 406 aa17.97■□□□□ 0.47
LINC00404-201ENST00000418660 A0A087X0B3 334 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 A0A0B4J269 797 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 TTC26A0AVF1 554 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 OGTO15294 1046 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 F13A1P00488 732 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 CXCL8P10145 99 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 MYBP10242 640 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 GAP43P17677 238 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 BRCC3P46736 316 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 ZXDAP98168 799 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 ZC2HC1CQ53FD0 456 aaPredicted RBP17.96■□□□□ 0.47
LINC00404-201ENST00000418660 ZNF720Q7Z2F6 126 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 SFR1Q86XK3 245 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 ZDHHC14Q8IZN3 488 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 KREMEN2Q8NCW0 462 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 ZDHHC7Q9NXF8 308 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.96■□□□□ 0.47
LINC00404-201ENST00000418660 PLXNA3P51805 1871 aa17.96■□□□□ 0.47
LINC00404-201ENST00000418660 C5orf42Q9H799 3197 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 I3L4J1 428 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 FAM189A1O60320 539 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 RFPL2O75678 378 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 TNFSF9P41273 254 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 PPP2R3AQ06190 1150 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 PTPN21Q16825 1174 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 SLC39A4Q6P5W5 647 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 CCDC149Q6ZUS6 474 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 ANKS3Q6ZW76 656 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 PLCD3Q8N3E9 789 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 TDRD5Q8NAT2 981 aaKnown RBP17.95■□□□□ 0.46
LINC00404-201ENST00000418660 HVCN1Q96D96 273 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 TSPAN18Q96SJ8 248 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 MSTO1Q9BUK6 570 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 MTRRQ9UBK8 725 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 BACE2Q9Y5Z0 518 aa17.95■□□□□ 0.46
LINC00404-201ENST00000418660 TRIP11Q15643 1979 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ANKRD63C9JTQ0 380 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ADAM12O43184 909 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 CUTAO60888 179 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ZMYND10O75800 440 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ADRB2P07550 413 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms