RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 INTS13Q9NVM9 706 aa13.59□□□□□ -0.23
TRAPPC12-206ENST00000417243 LRFN2Q9ULH4 789 aa13.59□□□□□ -0.23
TRAPPC12-206ENST00000417243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAPPC12-206ENST00000417243 PTPRJQ12913 1337 aa13.59□□□□□ -0.23
TRAPPC12-206ENST00000417243 KIAA1671Q9BY89 1806 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 A0A1B0GTH6 734 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 NFICP08651 508 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 TRIM49P0CI25 452 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 TRIM49CP0CI26 452 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 CDK11BP21127 795 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 COPB1P53618 953 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 TMEM132DQ14C87 1099 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 NAB2Q15742 525 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 ZACNQ401N2 412 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 DCAF17Q5H9S7 520 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 JADE1Q6IE81 842 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 RNF169Q8NCN4 708 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 PHOSPHO2Q8TCD6 241 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 CCDC127Q96BQ5 260 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 ZNF689Q96CS4 500 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 ZMAT2Q96NC0 199 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 GAD1Q99259 594 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 MRPL9Q9BYD2 267 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 TMEM8AQ9HCN3 771 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 SLC38A7Q9NVC3 462 aa13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 UBQLN1Q9UMX0 589 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-206ENST00000417243 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 DGKIO75912 1065 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 TPM2P07951 284 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 TMEM191BP0C7N4 346 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 FGFR1P11362 822 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 TNNI1P19237 187 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 FMO5P49326 533 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 MXI1P50539 228 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 SCNN1GP51170 649 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 FANCCQ00597 558 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 PPP3CAQ08209 521 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 VWA3BQ502W6 1294 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 TCERG1LQ5VWI1 586 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 KRT39Q6A163 491 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 URGCPQ8TCY9 931 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 HELQQ8TDG4 1101 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 ANKRD36BP1Q96IX9 119 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 CASD1Q96PB1 797 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 CXCL16Q9H2A7 254 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 NDST4Q9H3R1 872 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 TAB2Q9NYJ8 693 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 KLK14Q9P0G3 267 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 CXXC1Q9P0U4 656 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 KANSL3Q9P2N6 904 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 PLAGL2Q9UPG8 496 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 COQ4Q9Y3A0 265 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 GBF1Q92538 1859 aa13.57□□□□□ -0.24
TRAPPC12-206ENST00000417243 ZBBXA8MT70 800 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 GJB5O95377 273 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 C4BPAP04003 597 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 THP07101 528 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 LRPAP1P30533 357 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 BMP8BP34820 402 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 HTRA4P83105 476 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 DSC1Q08554 894 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 DUOXA2Q1HG44 320 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 ABI1Q8IZP0 508 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 LRRC43Q8N309 656 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 OR5B17Q8NGF7 314 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 CXorf38Q8TB03 319 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 ZNF516Q92618 1163 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 POP1Q99575 1024 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 TBC1D13Q9NVG8 400 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 ITGA11Q9UKX5 1188 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 TNRC18O15417 2968 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-206ENST00000417243 CARNS1A5YM72 827 aa13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 GOLGA6L3A6NEY3 463 aa13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 H0YGN5 161 aa13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 SERPINC1P01008 464 aa13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 TNNC2P02585 160 aa13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 GCLMP48507 274 aa13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 AFF1P51825 1210 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 TFAMQ00059 246 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 MYL7Q01449 175 aa13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 TUSC3Q13454 348 aa13.55□□□□□ -0.24
TRAPPC12-206ENST00000417243 FILIP1LQ4L180 1135 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms