RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 PRKD2Q9BZL6 878 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 CCSER1Q9C0I3 900 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 HAPLN2Q9GZV7 340 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 GOLGA2P5Q9HBQ8 144 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 ZDHHC7Q9NXF8 308 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 ODF2LQ9ULJ1 636 aa19.57■□□□□ 0.72
CPNE1-210ENST00000416778 ZMYND10O75800 440 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 PLCG1P19174 1290 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 ZNF131P52739 623 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 MCL1Q07820 350 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 RESTQ13127 1097 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 PSMD5Q16401 504 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 IER5LQ5T953 404 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 FAM173BQ6P4H8 233 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 PDXDC1Q6P996 788 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.56■□□□□ 0.72
CPNE1-210ENST00000416778 USP49Q70CQ1 688 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 GPBP1Q86WP2 473 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 SMG7Q92540 1137 aaKnown RBP19.56■□□□□ 0.72
CPNE1-210ENST00000416778 EPSTI1Q96J88 318 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 SNX27Q96L92 541 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 REEP2Q9BRK0 252 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 SMOC2Q9H3U7 446 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 SLC38A7Q9NVC3 462 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 CNTN3Q9P232 1028 aa19.56■□□□□ 0.72
CPNE1-210ENST00000416778 CLDN3O15551 220 aa19.55■□□□□ 0.72
CPNE1-210ENST00000416778 BRCC3P46736 316 aa19.55■□□□□ 0.72
CPNE1-210ENST00000416778 MTMR3Q13615 1198 aa19.55■□□□□ 0.72
CPNE1-210ENST00000416778 RAB33AQ14088 237 aa19.55■□□□□ 0.72
CPNE1-210ENST00000416778 SEZ6Q53EL9 994 aa19.55■□□□□ 0.72
CPNE1-210ENST00000416778 RSPO2Q6UXX9 243 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-210ENST00000416778 MYCT1Q8N699 235 aa19.55■□□□□ 0.72
CPNE1-210ENST00000416778 SRPRBQ9Y5M8 271 aaKnown RBP19.55■□□□□ 0.72
CPNE1-210ENST00000416778 ZDBF2Q9HCK1 2354 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 H0YCG3 227 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 I3L4J1 428 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 TRAPPC3O43617 180 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 MARCKSP29966 332 aaPredicted RBP19.54■□□□□ 0.72
CPNE1-210ENST00000416778 RPL9P32969 192 aaKnown RBP19.54■□□□□ 0.72
CPNE1-210ENST00000416778 OR1D2P34982 312 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 SPECC1Q5M775 1068 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 C18orf25Q96B23 403 aaPredicted RBP19.54■□□□□ 0.72
CPNE1-210ENST00000416778 FIZ1Q96SL8 496 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 KCNK12Q9HB15 430 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 MTRRQ9UBK8 725 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 FBXO2Q9UK22 296 aaPredicted RBP19.54■□□□□ 0.72
CPNE1-210ENST00000416778 FBXW11Q9UKB1 542 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 TBX20Q9UMR3 447 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 MTMR6Q9Y217 621 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 BACE2Q9Y5Z0 518 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 ZNF318Q5VUA4 2279 aa19.54■□□□□ 0.72
CPNE1-210ENST00000416778 PODXLO00592 558 aa19.53■□□□□ 0.72
CPNE1-210ENST00000416778 PDGFBP01127 241 aaPredicted RBP19.53■□□□□ 0.72
CPNE1-210ENST00000416778 HARSP12081 509 aaKnown RBP19.53■□□□□ 0.72
CPNE1-210ENST00000416778 TKTP29401 623 aaKnown RBP19.53■□□□□ 0.72
CPNE1-210ENST00000416778 NOLC1Q14978 699 aaKnown RBP eCLIP19.53■□□□□ 0.723e-8■□□□□ 8.2
CPNE1-210ENST00000416778 CLIC6Q96NY7 704 aa19.53■□□□□ 0.72
CPNE1-210ENST00000416778 MYADMQ96S97 322 aa19.53■□□□□ 0.72
CPNE1-210ENST00000416778 PLEKHA5Q9HAU0 1116 aa19.53■□□□□ 0.72
CPNE1-210ENST00000416778 PIDD1Q9HB75 910 aa19.53■□□□□ 0.72
CPNE1-210ENST00000416778 PARVGQ9HBI0 331 aa19.53■□□□□ 0.72
CPNE1-210ENST00000416778 ANKFY1Q9P2R3 1169 aa19.53■□□□□ 0.72
CPNE1-210ENST00000416778 TRAK2O60296 914 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 FAM13AO94988 1023 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 PIGRP01833 764 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 CLTAP09496 248 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 HNRNPA1P09651 372 aaKnown RBP eCLIP19.52■□□□□ 0.72
CPNE1-210ENST00000416778 SCP2P22307 547 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 AVPR2P30518 371 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 TDGQ13569 410 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 MRPL58Q14197 206 aaKnown RBP19.52■□□□□ 0.72
CPNE1-210ENST00000416778 ZBTB6Q15916 424 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 UVSSAQ2YD98 709 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 SUGP1Q8IWZ8 645 aaKnown RBP19.52■□□□□ 0.72
CPNE1-210ENST00000416778 LARP4BQ92615 738 aaKnown RBP19.52■□□□□ 0.72
CPNE1-210ENST00000416778 STAMQ92783 540 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 EPS15L1Q9UBC2 864 aa19.52■□□□□ 0.72
CPNE1-210ENST00000416778 PLXNA3P51805 1871 aa19.52■□□□□ 0.71
CPNE1-210ENST00000416778 CLUHO75153 1309 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 TTC26A0AVF1 554 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 K7ELQ4 463 aaPredicted RBP19.51■□□□□ 0.71
CPNE1-210ENST00000416778 TBC1D4O60343 1298 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 ADRB2P07550 413 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
CPNE1-210ENST00000416778 GBP2P32456 591 aaPredicted RBP19.51■□□□□ 0.71
CPNE1-210ENST00000416778 GTF2BQ00403 316 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 ANKS3Q6ZW76 656 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 RASSF8Q8NHQ8 419 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.51■□□□□ 0.71
CPNE1-210ENST00000416778 IGSF9Q9P2J2 1179 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 CDY1Q9Y6F8 540 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 TRIP11Q15643 1979 aa19.51■□□□□ 0.71
CPNE1-210ENST00000416778 A0A0B4J269 797 aa19.5■□□□□ 0.71
CPNE1-210ENST00000416778 FAM189A1O60320 539 aa19.5■□□□□ 0.71
CPNE1-210ENST00000416778 KRT18P05783 430 aaKnown RBP19.5■□□□□ 0.71
CPNE1-210ENST00000416778 LAMP2P13473 410 aa19.5■□□□□ 0.71
CPNE1-210ENST00000416778 NMT1P30419 496 aaKnown RBP19.5■□□□□ 0.71
CPNE1-210ENST00000416778 HOXA9P31269 272 aa19.5■□□□□ 0.71
CPNE1-210ENST00000416778 TNFSF9P41273 254 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms