RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 TARSP26639 723 aaKnown RBP14.23□□□□□ -0.13
LINC00339-202ENST00000416769 GJB2P29033 226 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
LINC00339-202ENST00000416769 BRCC3P46736 316 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 GUCY1B3Q02153 619 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-202ENST00000416769 ECM1Q16610 540 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 SLC44A4Q53GD3 710 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 AXDND1Q5T1B0 1012 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-202ENST00000416769 LIN9Q5TKA1 542 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 DGLUCYQ7Z3D6 616 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 DIS3L2Q8IYB7 885 aaKnown RBP14.23□□□□□ -0.13
LINC00339-202ENST00000416769 HACE1Q8IYU2 909 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 FAM184AQ8NB25 1140 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 SPATA6Q9NWH7 488 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-202ENST00000416769 KIF3AQ9Y496 699 aa14.23□□□□□ -0.13
LINC00339-202ENST00000416769 KANSL1LA0AUZ9 987 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 PRKCBP05771 671 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 CEBPBP17676 345 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 FGFR3P22607 806 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 MCM7P33993 719 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 CLCNKBP51801 687 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 PRPF4BQ13523 1007 aaKnown RBP14.22□□□□□ -0.13
LINC00339-202ENST00000416769 NT5DC1Q5TFE4 455 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 GPR65Q8IYL9 337 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 MCRS1Q96EZ8 462 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 DDX27Q96GQ7 796 aaKnown RBP14.22□□□□□ -0.13
LINC00339-202ENST00000416769 NAP1L4Q99733 375 aaKnown RBP14.22□□□□□ -0.13
LINC00339-202ENST00000416769 LTB4R2Q9NPC1 389 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 PRMT7Q9NVM4 692 aaPredicted RBP14.22□□□□□ -0.13
LINC00339-202ENST00000416769 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
LINC00339-202ENST00000416769 CDY1Q9Y6F8 540 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 EPG5Q9HCE0 2579 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 ZMYM2Q9UBW7 1377 aa14.22□□□□□ -0.13
LINC00339-202ENST00000416769 NCANO14594 1321 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 FAM170BA6NMN3 283 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 MEFVO15553 781 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-202ENST00000416769 THP07101 528 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 HNRNPA1P09651 372 aaKnown RBP eCLIP14.21□□□□□ -0.13
LINC00339-202ENST00000416769 XBP1P17861 261 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 CSTF1Q05048 431 aaKnown RBP14.21□□□□□ -0.13
LINC00339-202ENST00000416769 RAB33AQ14088 237 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 FAM187BQ17R55 369 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 TMEM132AQ24JP5 1023 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 PABPC1LQ4VXU2 614 aaKnown RBP14.21□□□□□ -0.13
LINC00339-202ENST00000416769 PADI6Q6TGC4 694 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 TPRG1Q6ZUI0 275 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 RUBCNQ92622 972 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 TCEAL4Q96EI5 215 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 IPO9Q96P70 1041 aaKnown RBP14.21□□□□□ -0.13
LINC00339-202ENST00000416769 PPP1R10Q96QC0 940 aaKnown RBP14.21□□□□□ -0.13
LINC00339-202ENST00000416769 HEBP1Q9NRV9 189 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 MTRRQ9UBK8 725 aa14.21□□□□□ -0.13
LINC00339-202ENST00000416769 COL4A2P08572 1712 aa14.21□□□□□ -0.14
LINC00339-202ENST00000416769 N4BP3O15049 544 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 B3GAT3O94766 335 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 C1RP00736 705 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 PDIA4P13667 645 aaKnown RBP14.2□□□□□ -0.14
LINC00339-202ENST00000416769 FCARP24071 287 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 CREMQ03060 361 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 FZD5Q13467 585 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 GRM2Q14416 872 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 NBR1Q14596 966 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 RSPO4Q2I0M5 234 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-202ENST00000416769 TANGO2Q6ICL3 276 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-202ENST00000416769 ZBTB8OSQ8IWT0 167 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 PRIMPOLQ96LW4 560 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 SEMA4AQ9H3S1 761 aa14.2□□□□□ -0.14
LINC00339-202ENST00000416769 ACKR2O00590 384 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 SEC24AO95486 1093 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 RHOP08100 348 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 PDCP20941 246 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 HOXA9P31269 272 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 HOXC13P31276 330 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 CCR2P41597 374 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 OSTNP61366 133 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 ZNF174Q15697 407 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 LARP1BQ659C4 914 aaKnown RBP14.19□□□□□ -0.14
LINC00339-202ENST00000416769 DEPTORQ8TB45 409 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 ZMAT2Q96NC0 199 aaKnown RBP14.19□□□□□ -0.14
LINC00339-202ENST00000416769 DLL3Q9NYJ7 618 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 MRPS23Q9Y3D9 190 aaKnown RBP14.19□□□□□ -0.14
LINC00339-202ENST00000416769 ACACBO00763 2458 aa14.19□□□□□ -0.14
LINC00339-202ENST00000416769 SDK1Q7Z5N4 2213 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 TICRRQ7Z2Z1 1910 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 LAMTOR5O43504 91 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 KINO60870 393 aaKnown RBP14.18□□□□□ -0.14
LINC00339-202ENST00000416769 XYLBO75191 536 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 GJA1P17302 382 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 CYP11B2P19099 503 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 ARPP19P56211 112 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 ROR1Q01973 937 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 TRIM29Q14134 588 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 LPAL2Q16609 132 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 MAPK6Q16659 721 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 UPP1Q16831 310 aa14.18□□□□□ -0.14
LINC00339-202ENST00000416769 ZC3H14Q6PJT7 736 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms