RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 RHOBTB2Q9BYZ6 727 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 NT5C3AQ9H0P0 336 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 ANKFY1Q9P2R3 1169 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 SCN1AP35498 2009 aa16.56■□□□□ 0.24
UBXN4-203ENST00000416538 MCF2P10911 925 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 TKTP29401 623 aaKnown RBP16.55■□□□□ 0.24
UBXN4-203ENST00000416538 NCKAP1LP55160 1127 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 MTMR3Q13615 1198 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 MCM6Q14566 821 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.55■□□□□ 0.24
UBXN4-203ENST00000416538 GPBP1Q86WP2 473 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 SMG7Q92540 1137 aaKnown RBP16.55■□□□□ 0.24
UBXN4-203ENST00000416538 C18orf25Q96B23 403 aaPredicted RBP16.55■□□□□ 0.24
UBXN4-203ENST00000416538 CDK5RAP3Q96JB5 506 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 AK8Q96MA6 479 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 MFSD14AQ96MC6 490 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 MYADMQ96S97 322 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 FIZ1Q96SL8 496 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 CCDC94Q9BW85 323 aaPredicted RBP16.55■□□□□ 0.24
UBXN4-203ENST00000416538 WDR6Q9NNW5 1121 aaKnown RBP16.55■□□□□ 0.24
UBXN4-203ENST00000416538 CNTN3Q9P232 1028 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
UBXN4-203ENST00000416538 TCHHQ07283 1943 aa16.55■□□□□ 0.24
UBXN4-203ENST00000416538 ZMYND10O75800 440 aa16.54■□□□□ 0.24
UBXN4-203ENST00000416538 B3GAT3O94766 335 aa16.54■□□□□ 0.24
UBXN4-203ENST00000416538 NHLH1Q02575 133 aa16.54■□□□□ 0.24
UBXN4-203ENST00000416538 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
UBXN4-203ENST00000416538 NOLC1Q14978 699 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBXN4-203ENST00000416538 SPECC1Q5M775 1068 aa16.54■□□□□ 0.24
UBXN4-203ENST00000416538 ZBTB41Q5SVQ8 909 aa16.54■□□□□ 0.24
UBXN4-203ENST00000416538 RAD54LQ92698 747 aa16.54■□□□□ 0.24
UBXN4-203ENST00000416538 KCND2Q9NZV8 630 aa16.54■□□□□ 0.24
UBXN4-203ENST00000416538 MTRRQ9UBK8 725 aa16.54■□□□□ 0.24
UBXN4-203ENST00000416538 FAM189A1O60320 539 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 TOM1L1O75674 476 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 CXCL8P10145 99 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 KCNE1P15382 129 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 SYT1P21579 422 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 TNFSF9P41273 254 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 ZNF131P52739 623 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 CREMQ03060 361 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 SLC10A6Q3KNW5 377 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 SLC39A4Q6P5W5 647 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 OTOP3Q7RTS5 596 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 KCTD17Q8N5Z5 321 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 HDAC7Q8WUI4 952 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 RSAD2Q8WXG1 361 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 KCNN1Q92952 543 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 EPSTI1Q96J88 318 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 PRKD2Q9BZL6 878 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 PLEKHA4Q9H4M7 779 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 ZDHHC7Q9NXF8 308 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 TUBGCP4Q9UGJ1 667 aa16.53■□□□□ 0.24
UBXN4-203ENST00000416538 FBXO2Q9UK22 296 aaPredicted RBP16.53■□□□□ 0.24
UBXN4-203ENST00000416538 FARP1Q9Y4F1 1045 aaPredicted RBP16.53■□□□□ 0.24
UBXN4-203ENST00000416538 PODXLO00592 558 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 SLC26A4O43511 780 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 NARSO43776 548 aaKnown RBP16.52■□□□□ 0.24
UBXN4-203ENST00000416538 C1RP00736 705 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 MARCKSP29966 332 aaPredicted RBP16.52■□□□□ 0.24
UBXN4-203ENST00000416538 LONP1P36776 959 aaKnown RBP16.52■□□□□ 0.24
UBXN4-203ENST00000416538 UBA7P41226 1012 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
UBXN4-203ENST00000416538 NTHL1P78549 312 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 SPAG1Q07617 926 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 MCL1Q07820 350 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 TCF15Q12870 199 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 ELAVL2Q12926 359 aaKnown RBP16.52■□□□□ 0.24
UBXN4-203ENST00000416538 DCLRE1AQ6PJP8 1040 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 ZPBP2Q6X784 338 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 HAUS6Q7Z4H7 955 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 APBB1IPQ7Z5R6 666 aaPredicted RBP16.52■□□□□ 0.24
UBXN4-203ENST00000416538 UBALD2Q8IYN6 164 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 PLCD3Q8N3E9 789 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 ST13P5Q8NFI4 369 aaPredicted RBP16.52■□□□□ 0.24
UBXN4-203ENST00000416538 UROC1Q96N76 676 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 ACAP3Q96P50 834 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 PHOX2BQ99453 314 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 TCHPQ9BT92 498 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 KCNK12Q9HB15 430 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 TOPORSQ9NS56 1045 aaPredicted RBP16.52■□□□□ 0.24
UBXN4-203ENST00000416538 ODF2LQ9ULJ1 636 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 MTMR6Q9Y217 621 aa16.52■□□□□ 0.24
UBXN4-203ENST00000416538 TISP43B9A030 160 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 BMP15O95972 392 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 C8AP07357 584 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 OR1D2P34982 312 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 STRN3Q13033 797 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 CWF19L1Q69YN2 538 aaKnown RBP16.51■□□□□ 0.23
UBXN4-203ENST00000416538 GET4Q7L5D6 327 aaPredicted RBP16.51■□□□□ 0.23
UBXN4-203ENST00000416538 SUGP1Q8IWZ8 645 aaKnown RBP16.51■□□□□ 0.23
UBXN4-203ENST00000416538 ACSF2Q96CM8 615 aaPredicted RBP16.51■□□□□ 0.23
UBXN4-203ENST00000416538 CALML4Q96GE6 196 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 CLIC6Q96NY7 704 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 CCSER1Q9C0I3 900 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 IKZF4Q9H2S9 585 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 CDY1Q9Y6F8 540 aa16.51■□□□□ 0.23
UBXN4-203ENST00000416538 K7ENM7 598 aa16.5■□□□□ 0.23
UBXN4-203ENST00000416538 PIGRP01833 764 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms