RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 FAM205CA6NFA0 338 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 LRRIQ4A6NIV6 560 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 TBX3O15119 743 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 AXIN1O15169 862 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 CCNT1O60563 726 aaKnown RBP10.36□□□□□ -0.75
LINC01238-201ENST00000416204 RECQL4O94761 1208 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 CCNE1P24864 410 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 PDIA3P30101 505 aaKnown RBP10.36□□□□□ -0.75
LINC01238-201ENST00000416204 HOXA9P31269 272 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 ARL2P36404 184 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 CCR2P41597 374 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 BRCC3P46736 316 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 CXCL12P48061 93 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 NRLP54845 237 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 SSRP1Q08945 709 aaKnown RBP10.36□□□□□ -0.75
LINC01238-201ENST00000416204 STK3Q13188 491 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 RAB33AQ14088 237 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 MXD4Q14582 209 aaPredicted RBP10.36□□□□□ -0.75
LINC01238-201ENST00000416204 EPHA7Q15375 998 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 NAB2Q15742 525 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 TSGA10IPQ3SY00 556 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 AASDHQ4L235 1098 aaPredicted RBP10.36□□□□□ -0.75
LINC01238-201ENST00000416204 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 BLOC1S2Q6QNY1 142 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 C4orf19Q8IY42 314 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 GPR65Q8IYL9 337 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 HS6ST3Q8IZP7 471 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 FAM160A2Q8N612 972 aaPredicted RBP10.36□□□□□ -0.75
LINC01238-201ENST00000416204 PIGOQ8TEQ8 1089 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 ELSPBP1Q96BH3 223 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 TRMT61BQ9BVS5 477 aaKnown RBP10.36□□□□□ -0.75
LINC01238-201ENST00000416204 FAM126AQ9BYI3 521 aaPredicted RBP10.36□□□□□ -0.75
LINC01238-201ENST00000416204 ZSWIM4Q9H7M6 989 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 GDE1Q9NZC3 331 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 SNX14Q9Y5W7 946 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 NID2Q14112 1375 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 A0A1B0GUA9 196 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 SLC38A8A6NNN8 435 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 MAN2B1O00754 1011 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 PRRG1O14668 218 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 USO1O60763 962 aaKnown RBP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 DKC1O60832 514 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 B3GAT3O94766 335 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 SLITRK3O94933 977 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 LRG1P02750 347 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 EDN1P05305 212 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 PRKCBP05771 671 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 THP07101 528 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 HMGB1P09429 215 aaKnown RBP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 RPS6KB1P23443 525 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 PXNP49023 591 aaPredicted RBP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 CCR3P51677 355 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 CLCNKBP51801 687 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 CSRP2Q16527 193 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 EARS2Q5JPH6 523 aaKnown RBP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 EEF1DP3Q658K8 133 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 IL31Q6EBC2 164 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 VITQ6UXI7 678 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 CEP68Q76N32 757 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 EXOC8Q8IYI6 725 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 C3orf58Q8NDZ4 430 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 DDX27Q96GQ7 796 aaKnown RBP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 BORCS6Q96GS4 357 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 CCDC43Q96MW1 224 aaKnown RBP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 C22orf23Q9BZE7 217 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 ARRDC1-AS1Q9H2J1 176 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 PDZD7Q9H5P4 517 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 ZFP14Q9HCL3 533 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 POLD4Q9HCU8 107 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 ZNF334Q9HCZ1 680 aaPredicted RBP10.35□□□□□ -0.75
LINC01238-201ENST00000416204 SH3GLB2Q9NR46 395 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 MTRRQ9UBK8 725 aa10.35□□□□□ -0.75
LINC01238-201ENST00000416204 CCDC194A0A1B0GVG4 234 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 WDR27A2RRH5 827 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 SEC24AO95486 1093 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 CHRNB1P11230 501 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 MYL4P12829 197 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 PTPN2P17706 415 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 FGFR3P22607 806 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 PMLP29590 882 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 ROR1Q01973 937 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 SPIRE1Q08AE8 756 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 PPP2R5DQ14738 602 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 UVSSAQ2YD98 709 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 WDR44Q5JSH3 913 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 PRSS36Q5K4E3 855 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 MOXD1Q6UVY6 613 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 CD300LGQ6UXG3 332 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 KRT25Q7Z3Z0 450 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 NEK8Q86SG6 692 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 IFNLR1Q8IU57 520 aaPredicted RBP10.34□□□□□ -0.75
LINC01238-201ENST00000416204 DNASE1L2Q92874 299 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 RSPRY1Q96DX4 576 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 FAM20AQ96MK3 541 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 ASB16Q96NS5 453 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 EIF2AK1Q9BQI3 630 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms