RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 RUSC1Q9BVN2 902 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 USP21Q9UK80 565 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 OVOS2A0A0G2JMS6 1433 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 ADAMTS13Q76LX8 1427 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 PALM3A6NDB9 673 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 FANCGO15287 622 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 E2F6O75461 281 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 PRELPP51888 382 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 ALDH18A1P54886 795 aaKnown RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 CYTH1Q15438 398 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 GRAMD4Q6IC98 578 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 CYP2W1Q8TAV3 490 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 ARHGEF1Q92888 912 aaKnown RBP13.63□□□□□ -0.23
SCN1B-202ENST00000415950 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
SCN1B-202ENST00000415950 KIF1CO43896 1103 aaKnown RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 LPXNO60711 386 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 ATP5HO75947 161 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 NPEPPSP55786 919 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 COPS2P61201 443 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 COG2Q14746 738 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 ZNF667Q5HYK9 610 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 ANGPTL8Q6UXH0 198 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 FBXL13Q8NEE6 735 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 ATL2Q8NHH9 583 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 TMEM237Q96Q45 408 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 THTPAQ9BU02 230 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 FAM49AQ9H0Q0 323 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 DIS3Q9Y2L1 958 aaKnown RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 RASSF10A6NK89 507 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 F8VZ95 297 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 ZNF263O14978 683 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 LMNAP02545 664 aaKnown RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 MCF2P10911 925 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 KLC1Q07866 573 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 MORF4L2Q15014 288 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 SMTNL2Q2TAL5 461 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 KRT39Q6A163 491 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 C16orf87Q6PH81 154 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 NOP9Q86U38 636 aaKnown RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 CAVIN3Q969G5 261 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 NRBF2Q96F24 287 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 RBM41Q96IZ5 413 aaKnown RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 VPS39Q96JC1 886 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 CALR3Q96L12 384 aaKnown RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 FAM193BQ96PV7 902 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 SUCLA2Q9P2R7 463 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 MYOM1P52179 1685 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 PIK3C2BO00750 1634 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 SHBGP04278 402 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 NQO1P15559 274 aaKnown RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 RNF135Q8IUD6 432 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 FBXL16Q8N461 479 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 RAVER2Q9HCJ3 691 aaKnown RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 NEU2Q9Y3R4 380 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 FAM47DPA6NHR8 397 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 ZBTB39O15060 712 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 SERPINB4P48594 390 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 ITPK1Q13572 414 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 SLC30A9Q6PML9 568 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-202ENST00000415950 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 NCLNQ969V3 563 aa13.62□□□□□ -0.23
SCN1B-202ENST00000415950 CCDC78A2IDD5 438 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 BBOX1O75936 387 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 EYA4O95677 639 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 HNRNPCP07910 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCN1B-202ENST00000415950 RALAP11233 206 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 FGFR2P21802 821 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 MEA1Q16626 185 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 FIGNQ5HY92 759 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 POP1Q99575 1024 aaKnown RBP13.61□□□□□ -0.23
SCN1B-202ENST00000415950 CDC42EP4Q9H3Q1 356 aaKnown RBP13.61□□□□□ -0.23
SCN1B-202ENST00000415950 CPSF3Q9UKF6 684 aaKnown RBP13.61□□□□□ -0.23
SCN1B-202ENST00000415950 SHPRHQ149N8 1683 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 SEC24DO94855 1032 aaPredicted RBP13.61□□□□□ -0.23
SCN1B-202ENST00000415950 COILP38432 576 aaPredicted RBP13.61□□□□□ -0.23
SCN1B-202ENST00000415950 AP3B2Q13367 1082 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 TAF1BQ53T94 588 aaPredicted RBP13.61□□□□□ -0.23
SCN1B-202ENST00000415950 MIS18BP1Q6P0N0 1132 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 LVRNQ6Q4G3 990 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 DPP9Q86TI2 863 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 DNAJC9Q8WXX5 260 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 SPATA17Q96L03 361 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 SALL4Q9UJQ4 1053 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 RTN2O75298 545 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 SGPL1O95470 568 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 HSPA8P11142 646 aaKnown RBP13.61□□□□□ -0.23
SCN1B-202ENST00000415950 GNA15P30679 374 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 FLT3P36888 993 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 CRKP46108 304 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 BTKQ06187 659 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 MTMR1Q13613 665 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 EDRF1Q3B7T1 1238 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 SBK1Q52WX2 424 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 RASSF3Q86WH2 238 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 PNMA5Q96PV4 448 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms