RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CLDN10P78369 228 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 TBX2Q13207 712 aaPredicted RBP16.79■□□□□ 0.28
SHMT2-202ENST00000414700 BFSP2Q13515 415 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 DCAF4L1Q3SXM0 396 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 TEX35Q5T0J7 233 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 NECAB2Q7Z6G3 386 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 PLCD3Q8N3E9 789 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
SHMT2-202ENST00000414700 CPLX3Q8WVH0 158 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 ELMO3Q96BJ8 720 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 SCLYQ96I15 445 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 TOX2Q96NM4 488 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 WNT8AQ9H1J5 351 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 HIPK3Q9H422 1215 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 RPF1Q9H9Y2 349 aaKnown RBP16.79■□□□□ 0.28
SHMT2-202ENST00000414700 GCNT4Q9P109 453 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
SHMT2-202ENST00000414700 GRM5P41594 1212 aa16.78■□□□□ 0.28
SHMT2-202ENST00000414700 MXI1P50539 228 aa16.78■□□□□ 0.28
SHMT2-202ENST00000414700 CCL23P55773 120 aa16.78■□□□□ 0.28
SHMT2-202ENST00000414700 MYL7Q01449 175 aa16.78■□□□□ 0.28
SHMT2-202ENST00000414700 SV2AQ7L0J3 742 aa16.78■□□□□ 0.28
SHMT2-202ENST00000414700 EFCAB13Q8IY85 973 aa16.78■□□□□ 0.28
SHMT2-202ENST00000414700 PCMTD1Q96MG8 357 aaPredicted RBP16.78■□□□□ 0.28
SHMT2-202ENST00000414700 IFIH1Q9BYX4 1025 aaKnown RBP16.78■□□□□ 0.28
SHMT2-202ENST00000414700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.78■□□□□ 0.283e-6■■■■■ 44
SHMT2-202ENST00000414700 IPPQ9Y573 584 aa16.78■□□□□ 0.28
SHMT2-202ENST00000414700 LACTBL1A8MY62 500 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 PNMA6AP0CW24 399 aaPredicted RBP16.77■□□□□ 0.28
SHMT2-202ENST00000414700 PON1P27169 355 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 CYP2C18P33260 490 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 FXR1P51114 621 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHMT2-202ENST00000414700 CLCN6P51797 869 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 GSDMDP57764 484 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 EXOC3L4Q17RC7 722 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 DPY19L2P1Q6NXN4 242 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 TXLNBQ8N3L3 684 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 ACAP3Q96P50 834 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 TRMT1Q9NXH9 659 aaKnown RBP16.77■□□□□ 0.28
SHMT2-202ENST00000414700 ITIH6Q6UXX5 1313 aa16.77■□□□□ 0.28
SHMT2-202ENST00000414700 ALPK3Q96L96 1907 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 TTC26A0AVF1 554 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 RECQL4O94761 1208 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 NOL4O94818 638 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 NFICP08651 508 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 TDRD10Q5VZ19 366 aaKnown RBP16.77■□□□□ 0.27
SHMT2-202ENST00000414700 C15orf39Q6ZRI6 1047 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 UBE2Q1Q7Z7E8 422 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 USP38Q8NB14 1042 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 LMO3Q8TAP4 145 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 TAS1R2Q8TE23 839 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 SEMA4DQ92854 862 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 CGRRF1Q99675 332 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 TTYH3Q9C0H2 523 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 TMEM8AQ9HCN3 771 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 FAM105AQ9NUU6 356 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 TBX21Q9UL17 535 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 SQORQ9Y6N5 450 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 RALGAPA2Q2PPJ7 1873 aa16.77■□□□□ 0.27
SHMT2-202ENST00000414700 TUBB4AP04350 444 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 TRIM21P19474 475 aaKnown RBP16.76■□□□□ 0.27
SHMT2-202ENST00000414700 IBSPP21815 317 aaPredicted RBP16.76■□□□□ 0.27
SHMT2-202ENST00000414700 CASP14P31944 242 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 PLA2G4AP47712 749 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 ADKP55263 362 aaKnown RBP16.76■□□□□ 0.27
SHMT2-202ENST00000414700 DSC3Q14574 896 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 KRT39Q6A163 491 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 TRIM65Q6PJ69 517 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 GBP6Q6ZN66 633 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 ADAM2Q99965 735 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 LSM14BQ9BX40 385 aaKnown RBP16.76■□□□□ 0.27
SHMT2-202ENST00000414700 MTMR12Q9C0I1 747 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 CHST12Q9NRB3 414 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 KLK14Q9P0G3 267 aa16.76■□□□□ 0.27
SHMT2-202ENST00000414700 PDCD11Q14690 1871 aaKnown RBP16.76■□□□□ 0.27
SHMT2-202ENST00000414700 GTPBP10A4D1E9 387 aaKnown RBP16.75■□□□□ 0.27
SHMT2-202ENST00000414700 C4BPAP04003 597 aaKnown RBP16.75■□□□□ 0.27
SHMT2-202ENST00000414700 ITGB8P26012 769 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 TCTN1Q2MV58 587 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 ERCC6LQ2NKX8 1250 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 EPC2Q52LR7 807 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 JADE1Q6IE81 842 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 GJB7Q6PEY0 223 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 USP37Q86T82 979 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 RTN4RL1Q86UN2 441 aaPredicted RBP16.75■□□□□ 0.27
SHMT2-202ENST00000414700 LPPQ93052 612 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 ZMAT2Q96NC0 199 aaKnown RBP16.75■□□□□ 0.27
SHMT2-202ENST00000414700 SIX2Q9NPC8 291 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 RANBP2P49792 3224 aaKnown RBP16.75■□□□□ 0.27
SHMT2-202ENST00000414700 CLTBP09497 229 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 TFAMQ00059 246 aaKnown RBP16.75■□□□□ 0.27
SHMT2-202ENST00000414700 ZACNQ401N2 412 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 GLRA4Q5JXX5 417 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 WDR49Q8IV35 697 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 DBF4BQ8NFT6 615 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 LINC01599Q8WXQ3 324 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 ARGLU1Q9NWB6 273 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms