RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 TMEM189-UBE2V1I3L0A0 370 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 PODXLO00592 558 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 CLDN3O15551 220 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 ZMYND10O75800 440 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 PDGFBP01127 241 aaPredicted RBP18.38■□□□□ 0.53
COL6A2-205ENST00000413758 PLCG1P19174 1290 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 PROZP22891 400 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 TKTP29401 623 aaKnown RBP18.38■□□□□ 0.53
COL6A2-205ENST00000413758 OR1D2P34982 312 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 BRCC3P46736 316 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 UPP1Q16831 310 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 ARSHQ5FYA8 562 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 PPM1LQ5SGD2 360 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 GET4Q7L5D6 327 aaPredicted RBP18.38■□□□□ 0.53
COL6A2-205ENST00000413758 HAUS6Q7Z4H7 955 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 ZNF707Q96C28 371 aaPredicted RBP18.38■□□□□ 0.53
COL6A2-205ENST00000413758 REEP2Q9BRK0 252 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 ODF2LQ9ULJ1 636 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 POLIQ9UNA4 740 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 NUB1Q9Y5A7 615 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 TRIP11Q15643 1979 aa18.38■□□□□ 0.53
COL6A2-205ENST00000413758 K7ENM7 598 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 TBCAO75347 108 aaKnown RBP18.37■□□□□ 0.53
COL6A2-205ENST00000413758 FGFR3P22607 806 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 IGFBP6P24592 240 aaPredicted RBP18.37■□□□□ 0.53
COL6A2-205ENST00000413758 LIG4P49917 911 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 CEBPZQ03701 1054 aaKnown RBP18.37■□□□□ 0.53
COL6A2-205ENST00000413758 GRIN1Q05586 938 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 SOX4Q06945 474 aaPredicted RBP18.37■□□□□ 0.53
COL6A2-205ENST00000413758 TDGQ13569 410 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 IER5LQ5T953 404 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 ALKAL1Q6UXT8 129 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 RAD54LQ92698 747 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 ZMAT2Q96NC0 199 aaKnown RBP18.37■□□□□ 0.53
COL6A2-205ENST00000413758 FBXW11Q9UKB1 542 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 FBXL21Q9UKT6 434 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 CLIC4Q9Y696 253 aa18.37■□□□□ 0.53
COL6A2-205ENST00000413758 MTCL1Q9Y4B5 1905 aaKnown RBP18.37■□□□□ 0.53
COL6A2-205ENST00000413758 ABLIM1O14639 778 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 ADAM12O43184 909 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 C8AP07357 584 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 KCNE1P15382 129 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 MARCKSP29966 332 aaPredicted RBP18.36■□□□□ 0.53
COL6A2-205ENST00000413758 VCPP55072 806 aaKnown RBP18.36■□□□□ 0.53
COL6A2-205ENST00000413758 NCKAP1LP55160 1127 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 XKR4Q5GH76 650 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 ANKS3Q6ZW76 656 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 C3orf58Q8NDZ4 430 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 C18orf25Q96B23 403 aaPredicted RBP18.36■□□□□ 0.53
COL6A2-205ENST00000413758 PRRX2Q99811 253 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 RHOBTB2Q9BYZ6 727 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 KCNK12Q9HB15 430 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 PARVGQ9HBI0 331 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 CNTN3Q9P232 1028 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 IGSF9Q9P2J2 1179 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 CDY1Q9Y6F8 540 aa18.36■□□□□ 0.53
COL6A2-205ENST00000413758 TRIOO75962 3097 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 HNRNPDLO14979 420 aaKnown RBP18.35■□□□□ 0.53
COL6A2-205ENST00000413758 CCL16O15467 120 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 N4BP1O75113 896 aaKnown RBP18.35■□□□□ 0.53
COL6A2-205ENST00000413758 XYLBO75191 536 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 SYT1P21579 422 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 FSHRP23945 695 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 AVPR2P30518 371 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 RPL9P32969 192 aaKnown RBP18.35■□□□□ 0.53
COL6A2-205ENST00000413758 ARPP19P56211 112 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 NHLH1Q02575 133 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 SPECC1Q5M775 1068 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 GRASPQ7Z6J2 395 aaPredicted RBP18.35■□□□□ 0.53
COL6A2-205ENST00000413758 SLC7A14Q8TBB6 771 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 LARP4BQ92615 738 aaKnown RBP18.35■□□□□ 0.53
COL6A2-205ENST00000413758 MYADMQ96S97 322 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 BACH2Q9BYV9 841 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 BLOC1S4Q9NUP1 217 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 MTRRQ9UBK8 725 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
COL6A2-205ENST00000413758 CITO14578 2027 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 TRAK2O60296 914 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 CLTAP09496 248 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 HNRNPA1P09651 372 aaKnown RBP eCLIP18.34■□□□□ 0.53
COL6A2-205ENST00000413758 CXCL8P10145 99 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 MCM4P33991 863 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 TXLNAP40222 546 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 PTPN5P54829 565 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 MCL1Q07820 350 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 RAB33AQ14088 237 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 SLC10A6Q3KNW5 377 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 AXDND1Q5T1B0 1012 aaPredicted RBP18.34■□□□□ 0.53
COL6A2-205ENST00000413758 FAM173BQ6P4H8 233 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 CD300LGQ6UXG3 332 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 ALYREFQ86V81 257 aaKnown RBP18.34■□□□□ 0.53
COL6A2-205ENST00000413758 PRSS33Q8NF86 280 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 LRRC15Q8TF66 581 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 RSAD2Q8WXG1 361 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 EPSTI1Q96J88 318 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.34■□□□□ 0.53
COL6A2-205ENST00000413758 TBX20Q9UMR3 447 aa18.34■□□□□ 0.53
COL6A2-205ENST00000413758 MUC6Q6W4X9 2439 aa18.33■□□□□ 0.53
COL6A2-205ENST00000413758 VWA8A3KMH1 1905 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms