RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 RGS18Q9NS28 235 aa16.37■□□□□ 0.21
PUDP-202ENST00000412827 FAM207AQ9NSI2 230 aaPredicted RBP16.37■□□□□ 0.21
PUDP-202ENST00000412827 OGTO15294 1046 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 HOXA2O43364 376 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 NOL4O94818 638 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 ADRB2P07550 413 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 MCF2P10911 925 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 KLHDC7AQ5VTJ3 777 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 KRT39Q6A163 491 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 ZNF365Q70YC5 407 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 CBWD2Q8IUF1 395 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 RDH13Q8NBN7 331 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 EHBP1Q8NDI1 1231 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 HERVK_113Q902F9 699 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 BAP1Q92560 729 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 PGBD4Q96DM1 585 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 CPB2Q96IY4 423 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 SLC9A7Q96T83 725 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.36■□□□□ 0.21
PUDP-202ENST00000412827 GANQ9H2C0 597 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 FAM105AQ9NUU6 356 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 GCNT4Q9P109 453 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 LRFN2Q9ULH4 789 aa16.36■□□□□ 0.21
PUDP-202ENST00000412827 BZW2Q9Y6E2 419 aaKnown RBP16.36■□□□□ 0.21
PUDP-202ENST00000412827 ANXA13P27216 316 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 HOXA11P31270 313 aaPredicted RBP16.35■□□□□ 0.21
PUDP-202ENST00000412827 KLK7P49862 253 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 MXI1P50539 228 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 TMEM240Q5SV17 173 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 PDXDC1Q6P996 788 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 TRIM65Q6PJ69 517 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 OTOP2Q7RTS6 562 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 SAAL1Q96ER3 474 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 RNPC3Q96LT9 517 aaKnown RBP16.35■□□□□ 0.21
PUDP-202ENST00000412827 GDF15Q99988 308 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 FAM213AQ9BRX8 229 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 ELAC1Q9H777 363 aaKnown RBP16.35■□□□□ 0.21
PUDP-202ENST00000412827 AIPL1Q9NZN9 384 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 SCN5AQ14524 2016 aa16.35■□□□□ 0.21
PUDP-202ENST00000412827 DNAH12Q6ZR08 3092 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 A0A0U1RQF3 1178 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 GOLGA8IPA6NC78 632 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 GOLGA8JA6NMD2 632 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 RNF225M0QZC1 329 aaPredicted RBP16.34■□□□□ 0.21
PUDP-202ENST00000412827 KIF2AO00139 706 aaPredicted RBP16.34■□□□□ 0.21
PUDP-202ENST00000412827 ABLIM1O14639 778 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 ZC3H11AO75152 810 aaKnown RBP eCLIP16.34■□□□□ 0.21
PUDP-202ENST00000412827 NPTXRO95502 500 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 UCHL3P15374 230 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 BMP8BP34820 402 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 CYLC1P35663 651 aaPredicted RBP16.34■□□□□ 0.21
PUDP-202ENST00000412827 WDR5P61964 334 aaKnown RBP16.34■□□□□ 0.21
PUDP-202ENST00000412827 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 C1orf220Q5T0J3 134 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 NPAS4Q8IUM7 802 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 BRSK2Q8IWQ3 736 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 CCAR2Q8N163 923 aaKnown RBP16.34■□□□□ 0.21
PUDP-202ENST00000412827 FNBP1Q96RU3 617 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 CCDC94Q9BW85 323 aaPredicted RBP16.34■□□□□ 0.21
PUDP-202ENST00000412827 OSBPL7Q9BZF2 842 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 UBN1Q9NPG3 1134 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 TMEM161AQ9NX61 479 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 PCDHB2Q9Y5E7 798 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 SLC4A7Q9Y6M7 1214 aa16.34■□□□□ 0.21
PUDP-202ENST00000412827 SSU72P8A0A1W2PR75 194 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 ENPP3O14638 875 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 MGEA5O60502 916 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 ZNF623O75123 536 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 EOMESO95936 686 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 EDN1P05305 212 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 CCDC172P0C7W6 258 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 TRIM49P0CI25 452 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 TRIM49CP0CI26 452 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 HARSP12081 509 aaKnown RBP16.33■□□□□ 0.2
PUDP-202ENST00000412827 SLC9A1P19634 815 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 YARSP54577 528 aaKnown RBP16.33■□□□□ 0.2
PUDP-202ENST00000412827 EPHB4P54760 987 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 POLR2FP61218 127 aaKnown RBP16.33■□□□□ 0.2
PUDP-202ENST00000412827 PPP3CAQ08209 521 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 GOLGA8FQ08AF8 430 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 GOLGA8DPQ0D2H9 430 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 CBWD6Q4V339 395 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 CBWD3Q5JTY5 395 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 CBWD5Q5RIA9 395 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 SFMBT2Q5VUG0 894 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 WDR59Q6PJI9 974 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 CRELD2Q6UXH1 353 aaPredicted RBP16.33■□□□□ 0.2
PUDP-202ENST00000412827 RRAGAQ7L523 313 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 PHOSPHO2Q8TCD6 241 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 LINC01599Q8WXQ3 324 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 CDT1Q9H211 546 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 SIX2Q9NPC8 291 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 TOPORSQ9NS56 1045 aaPredicted RBP16.33■□□□□ 0.2
PUDP-202ENST00000412827 RBAKQ9NYW8 714 aaPredicted RBP16.33■□□□□ 0.2
PUDP-202ENST00000412827 APEX2Q9UBZ4 518 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 PCDHB7Q9Y5E2 793 aa16.33■□□□□ 0.2
PUDP-202ENST00000412827 PDE4DIPQ5VU43 2346 aa16.32■□□□□ 0.2
PUDP-202ENST00000412827 LRRIQ3A6PVS8 624 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms