RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 GDAQ9Y2T3 454 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 CFAP69A5D8W1 941 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SLC34A1Q06495 639 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 TUBA3CQ13748 450 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 TMED2Q15363 201 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 TTMPQ5BVD1 217 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 FASTKD5Q7L8L6 764 aaKnown RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 AP1M1Q9BXS5 423 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 GCNT4Q9P109 453 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 RABGEF1Q9UJ41 708 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 TBKBP1A7MCY6 615 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 DDHD2O94830 711 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 NDUFB10O96000 172 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 CA4P22748 312 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 HSD17B3P37058 310 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 ZNF543Q08ER8 600 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 NR1I3Q14994 352 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SURF1Q15526 300 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SLFN12LQ6IEE8 588 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 TTBK2Q6IQ55 1244 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 PADI6Q6TGC4 694 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 ELOA2Q8IYF1 753 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 RSAD2Q8WXG1 361 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 C6orf203Q9P0P8 240 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 LRFN2Q9ULH4 789 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 KDM4FA0A1W2PPD8 638 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 ZNF233A6NK53 670 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 KRT3P12035 628 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 HMOX2P30519 316 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 MDM2Q00987 491 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 BTKQ06187 659 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 NFX1Q12986 1120 aaKnown RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SLC10A5Q5PT55 438 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 CATSPER4Q7RTX7 472 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 COL23A1Q86Y22 540 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SLC26A7Q8TE54 656 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 ZNF184Q99676 751 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 ISCUQ9H1K1 167 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SNX25Q9H3E2 840 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 NDST4Q9H3R1 872 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 PCDH18Q9HCL0 1135 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 NYAP2Q9P242 653 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 BARX2Q9UMQ3 279 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 PITPNM2Q9BZ72 1349 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 E9PMD0 336 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 TBC1D12O60347 775 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 TDP2O95551 362 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 COPB2P35606 906 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 FNTAP49354 379 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 RABGAP1LQ5R372 815 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 EPM2AIP1Q7L775 607 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 SCAIQ8N9R8 606 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 FLCNQ8NFG4 579 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 MDM1Q8TC05 714 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 IGDCC4Q8TDY8 1250 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 FAM149B1Q96BN6 582 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 MSTO1Q9BUK6 570 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 TIMMDC1Q9NPL8 285 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 VWDEQ8N2E2 1590 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 POTEB3A0JP26 581 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 GOLGA8IPA6NC78 632 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 GOLGA8JA6NMD2 632 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 POTECB2RU33 542 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 PODXLO00592 558 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 CYTH3O43739 400 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 GRIN3BO60391 1043 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 FCER1AP12319 257 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 SFNP31947 248 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 ADCY8P40145 1251 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 QARSP47897 775 aaKnown RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 GMPSP49915 693 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 USP11P51784 963 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 MTMR2Q13614 643 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 TTLL4Q14679 1199 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 MESDQ14696 234 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 COG2Q14746 738 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 ANGEL2Q5VTE6 544 aaKnown RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 BSPRYQ5W0U4 402 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 C1orf228Q6PIY5 440 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 POTEBQ6S5H4 581 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 IZUMO2Q6UXV1 221 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 PDZD4Q76G19 769 aaPredicted RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 CLEC10AQ8IUN9 316 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 PPP4R1Q8TF05 950 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 LPAR1Q92633 364 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 RPF1Q9H9Y2 349 aaKnown RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 IFT122Q9HBG6 1241 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 PLGRKTQ9HBL7 147 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 MLXIPLQ9NP71 852 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 RBM12Q9NTZ6 932 aaKnown RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 TBK1Q9UHD2 729 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 GPR75-ASB3A0A0A6YYF3 556 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 P4HBP07237 508 aaKnown RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 ATP6V1B1P15313 513 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 POLR2EP19388 210 aaKnown RBP8.98□□□□□ -0.97
PBRM1-209ENST00000412587 ARFIP2P53365 341 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 ITGA9Q13797 1035 aa8.98□□□□□ -0.97
PBRM1-209ENST00000412587 DNAL1Q4LDG9 190 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms