RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KCTD20Q7Z5Y7 419 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 ATP6V0D2Q8N8Y2 350 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 CCDC197Q8NCU1 140 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SUPT20HQ8NEM7 779 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 PYROXD1Q8WU10 500 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 RAPGEF5Q92565 580 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SGK3Q96BR1 496 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 ZNF274Q96GC6 653 aaPredicted RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 USB1Q9BQ65 265 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 SDF4Q9BRK5 362 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 DESI2Q9BSY9 194 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 MRPL1Q9BYD6 325 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 ADNPQ9H2P0 1102 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 IL37Q9NZH6 218 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 ARHGAP23Q9P227 1491 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 MRC2Q9UBG0 1479 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 ANAPC5Q9UJX4 755 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 IFT52Q9Y366 437 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 CYP2D7A0A087X1C5 515 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 A6NL46 340 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 H0YGN5 161 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SH2B2O14492 632 aaPredicted RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 NDC80O14777 642 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 AQP9O43315 295 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 RSL1D1O76021 490 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 OR6B1O95007 311 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 POP4O95707 220 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 MYBP10242 640 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 PSMA4P25789 261 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 AXLP30530 894 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 L1CAMP32004 1257 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 VPS41P49754 854 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 GABREP78334 506 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SSPNQ14714 243 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 STK38Q15208 465 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 LEXMQ3ZCV2 418 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SGO2Q562F6 1265 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 CDKAL1Q5VV42 579 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 TTBK2Q6IQ55 1244 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 CATSPER4Q7RTX7 472 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 KIF2BQ8N4N8 673 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 PDZD8Q8NEN9 1154 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 FATE1Q969F0 183 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 FAR2Q96K12 515 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 COG8Q96MW5 612 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 INPP4AQ96PE3 977 aaPredicted RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 CCDC77Q9BR77 488 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 UNKQ9C0B0 810 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 RNF38Q9H0F5 515 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 RUBCNLQ9H714 662 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 ECT2Q9H8V3 914 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 ZNF287Q9HBT7 754 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 GIN1Q9NXP7 522 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 GPRC5BQ9NZH0 403 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 RNF14Q9UBS8 474 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 VPS51Q9UID3 782 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 FAF1Q9UNN5 650 aaPredicted RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 NFS1Q9Y697 457 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SPEF2Q9C093 1822 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 RIMBP3CA6NJZ7 1639 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 RIMBP3BA6NNM3 1639 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 RIMBP3Q9UFD9 1639 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 CLRN2A0PK11 232 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TYW5A2RUC4 315 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 PHF20L1A8MW92 1017 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 KRIT1O00522 736 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 FOSP01100 380 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 CCNB1P14635 433 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ZNF3P17036 446 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 CXCR2P25025 360 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 CRABP2P29373 138 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PHBP35232 272 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 GNL1P36915 607 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 VAV2P52735 878 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RAC1P63000 192 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PTK2Q05397 1052 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RASGRF1Q13972 1273 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 OLFM4Q6UX06 510 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 DTHD1Q6ZMT9 781 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RAPH1Q70E73 1250 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TAS1R3Q7RTX0 852 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SCYL3Q8IZE3 742 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ACTRT2Q8TDY3 377 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 OTUD5Q96G74 571 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SPZ1Q9BXG8 430 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ARMC7Q9H6L4 198 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 LZTFL1Q9NQ48 299 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 CYP26B1Q9NR63 512 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 UCKL1Q9NWZ5 548 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TMEM5Q9Y2B1 443 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RBM8AQ9Y5S9 174 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 H7C0C1 242 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 GMNNO75496 209 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 UBOX5O94941 541 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 DDX58O95786 925 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 UBTFL6P0CB48 400 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 POU2F1P14859 743 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PRKCAP17252 672 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ADKP55263 362 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 MAP3K7CLP57077 242 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms