RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SMC4Q9NTJ3 1288 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 TPCN1Q9ULQ1 816 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 SMG5Q9UPR3 1016 aaKnown RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 CFAP20Q9Y6A4 193 aaKnown RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 RHPN2P1A8MT19 583 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 NCK2O43639 380 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 MGEA5O60502 916 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 ENDOD1O94919 500 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 ALDH2P05091 517 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 HTR1BP28222 390 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 G3BP1Q13283 466 aaKnown RBP eCLIP5.33□□□□□ -1.56
BRCA1-204ENST00000412061 ADAM15Q13444 863 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 USP10Q14694 798 aaKnown RBP5.33□□□□□ -1.56
BRCA1-204ENST00000412061 C19orf54Q5BKX5 351 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 FAM209BQ5JX69 171 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 ABHD15Q6UXT9 468 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 LARP4Q71RC2 724 aaKnown RBP eCLIP5.33□□□□□ -1.56
BRCA1-204ENST00000412061 CLEC14AQ86T13 490 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 ANKRD18AQ8IVF6 992 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 KLHL36Q8N4N3 616 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 SPATA25Q9BR10 227 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 LRFN3Q9BTN0 628 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 C14orf93Q9H972 538 aaKnown RBP5.33□□□□□ -1.56
BRCA1-204ENST00000412061 CD320Q9NPF0 282 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 FAM184BQ9ULE4 1060 aa5.33□□□□□ -1.56
BRCA1-204ENST00000412061 A0A087WV62 115 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 A0A1B0GVC2 190 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 CAPN8A6NHC0 703 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 C9orf118A6NHY6 69 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 MBD4O95243 580 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 KRT1P04264 644 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 C1QTNF9P0C862 333 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 SMARCA1P28370 1054 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 ECHS1P30084 290 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 ADSLP30566 484 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 CSF2RBP32927 897 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 RXRGP48443 463 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 MRE11P49959 708 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 WNT3AP56704 352 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 IL10RAQ13651 578 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 MYBPC2Q14324 1141 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 UBE3CQ15386 1083 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 ZNF827Q17R98 1081 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 CCDC96Q2M329 555 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 ANO6Q4KMQ2 910 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 ZMAT1Q5H9K5 638 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 FAM26FQ5R3K3 315 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 ZNF648Q5T619 568 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 INTS11Q5TA45 600 aaKnown RBP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 IZUMO3Q5VZ72 239 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 MCTP2Q6DN12 878 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 MZT2BQ6NZ67 158 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 FAM180BQ6P0A1 224 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 CYP26C1Q6V0L0 522 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 C1orf122Q6ZSJ8 110 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 CARFQ8N187 725 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 TXNDC5Q8NBS9 432 aaKnown RBP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 PLA2G15Q8NCC3 412 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 BHLHE22Q8NFJ8 381 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 OR2I1PQ8NGU4 316 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 ZNF480Q8WV37 535 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 GCDHQ92947 438 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 DACT3Q96B18 629 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 SLC7A6OSQ96CW6 309 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-204ENST00000412061 CGRRF1Q99675 332 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 MANSC1Q9H8J5 431 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 KIAA1586Q9HCI6 787 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 KMT5AQ9NQR1 393 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 ADAM29Q9UKF5 820 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 CORO2BQ9UQ03 480 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 SLC45A1Q9Y2W3 748 aa5.32□□□□□ -1.56
BRCA1-204ENST00000412061 A6NCN8 305 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 FFAR3O14843 346 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 NCAM2O15394 837 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 SGTAO43765 313 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 ALDH1A2O94788 518 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 TSPAN15O95858 294 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 IFIT1P09914 478 aaKnown RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 IL12RB1P42701 662 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 AFF3P51826 1226 aaKnown RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 CASP5P51878 434 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 MAPK10P53779 464 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 TERF1P54274 439 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 RRADP55042 308 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 LINC00310P59036 64 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 ICA1Q05084 483 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 BLMHQ13867 455 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 SEPT2Q15019 361 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 MST1LQ2TV78 715 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 THEMIS2Q5TEJ8 643 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 AGBL4Q5VU57 503 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 SWSAP1Q6NVH7 229 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 PDZD4Q76G19 769 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 TTC7BQ86TV6 843 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
BRCA1-204ENST00000412061 MSL3Q8N5Y2 521 aaKnown RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 GIMAP8Q8ND71 665 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-204ENST00000412061 ZSCAN18Q8TBC5 510 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms