RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 TARDBPQ13148 414 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 MTM1Q13496 603 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 ATAT1Q5SQI0 421 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 FAM102BQ5T8I3 360 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 ANKS6Q68DC2 871 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 GPRIN1Q7Z2K8 1008 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 FAM83AQ86UY5 434 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 XYLT1Q86Y38 959 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 TCEAL8Q8IYN2 117 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 ANKRD35Q8N283 1001 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 ZGPATQ8N5A5 531 aaKnown RBP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 MDGA1Q8NFP4 955 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 SLC35B2Q8TB61 432 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 NSUN6Q8TEA1 469 aaKnown RBP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 STON2Q8WXE9 905 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 ST8SIA2Q92186 375 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 KAT5Q92993 513 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 HPS3Q969F9 1004 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 AIFM3Q96NN9 605 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 DMRTA2Q96SC8 542 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 GTPBP4Q9BZE4 634 aaKnown RBP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 SENP6Q9GZR1 1112 aaPredicted RBP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 EPC1Q9H2F5 836 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 SLC12A5Q9H2X9 1139 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 TDP1Q9NUW8 608 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 TMEM140Q9NV12 185 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 AURKAIP1Q9NWT8 199 aaPredicted RBP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 REXO2Q9Y3B8 237 aaKnown RBP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 ACTL7AQ9Y615 435 aa4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 CFAP20Q9Y6A4 193 aaKnown RBP4.24□□□□□ -1.73
RNU2-39P-201ENST00000410604 MYBBP1AQ9BQG0 1328 aaKnown RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 TBKBP1A7MCY6 615 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 CAPN14A8MX76 684 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 CXorf49A8MYA2 514 aaPredicted RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 PRPF3O43395 683 aaKnown RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 DTNBO60941 627 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 GPR32O75388 356 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 IPO13O94829 963 aaKnown RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 GNAT2P19087 354 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 ADRA1BP35368 520 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 RABGGTBP53611 331 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 HHEXQ03014 270 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 GTF2H3Q13889 308 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 BMT2Q1RMZ1 405 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 METTL24Q5JXM2 366 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 C1QL3Q5VWW1 255 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 AFMIDQ63HM1 303 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 NXNQ6DKJ4 435 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 PPP4R3AQ6IN85 833 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 CXorf57Q6NSI4 855 aaKnown RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 HTR3DQ70Z44 454 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 EPM2AIP1Q7L775 607 aaPredicted RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 TTC7BQ86TV6 843 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 SGMS1Q86VZ5 419 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 OR52N2Q8NGI0 321 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 IFI44Q8TCB0 444 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 TSR2Q969E8 191 aaKnown RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 RAB24Q969Q5 203 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 MRGPRX4Q96LA9 322 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 CPPED1Q9BRF8 314 aaPredicted RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 CPEB1Q9BZB8 566 aaKnown RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 MOCS1Q9NZB8 636 aa4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 NOB1Q9ULX3 412 aaKnown RBP4.23□□□□□ -1.73
RNU2-39P-201ENST00000410604 PNPLA7Q6ZV29 1317 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 TEX33O43247 280 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 OFD1O75665 1012 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 RPLP2P05387 115 aaKnown RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 SNRPA1P09661 255 aaKnown RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 LPOP22079 712 aaPredicted RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 ALDH1A3P47895 512 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 CTXN1P60606 82 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 RAB39AQ14964 217 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 PGS1Q32NB8 556 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 DCAF17Q5H9S7 520 aaPredicted RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 IFIT1BQ5T764 474 aaKnown RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 NAIF1Q69YI7 327 aaPredicted RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 OTUD7BQ6GQQ9 843 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 DRICH1Q6PGQ1 229 aaPredicted RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 B3GNT9Q6UX72 402 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 Q6ZRM9 215 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 TMPRSS6Q8IU80 811 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 FMNL3Q8IVF7 1028 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 DRC7Q8IY82 874 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 GSPT2Q8IYD1 628 aaKnown RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 MAGEB6Q8N7X4 407 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 ATXN2LQ8WWM7 1075 aaKnown RBP4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 MVB12AQ96EY5 273 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 TMX3Q96JJ7 454 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 CLPTM1LQ96KA5 538 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 MRI1Q9BV20 369 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 ANLNQ9NQW6 1124 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 FAM30AQ9NZY2 134 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 CALCOCO1Q9P1Z2 691 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 SLC23A1Q9UHI7 598 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 CLCA2Q9UQC9 943 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 HDAC5Q9UQL6 1122 aa4.22□□□□□ -1.73
RNU2-39P-201ENST00000410604 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
RNU2-39P-201ENST00000410604 KLRG2A4D1S0 409 aaPredicted RBP4.21□□□□□ -1.74
RNU2-39P-201ENST00000410604 PRR5-ARHGAP8B1AHC4 643 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms