RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 AP3M2P53677 418 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 MFAP3P55082 362 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 ETF1P62495 437 aaKnown RBP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 PCBP1Q15365 356 aaKnown RBP eCLIP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 SLC18A3Q16572 532 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 SPOPLQ6IQ16 392 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 RNF180Q86T96 592 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 ADPGKQ9BRR6 497 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 IFIH1Q9BYX4 1025 aaKnown RBP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 APOBEC3GQ9HC16 384 aaKnown RBP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 C1orf112Q9NSG2 853 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 TRIM17Q9Y577 477 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 A0A087X0T9 212 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 LACTBL1A8MY62 500 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 NFICP08651 508 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 FAM228BP0C875 321 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 MRPS6P82932 125 aaKnown RBP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 TFAMQ00059 246 aaKnown RBP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 NCOA4Q13772 614 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 LHX8Q68G74 356 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 NOTUMQ6P988 496 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 SLC27A1Q6PCB7 646 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 ZNF662Q6ZS27 426 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 TRAPPC11Q7Z392 1133 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 SERINC5Q86VE9 423 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 FMNL3Q8IVF7 1028 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 SHC3Q92529 594 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 EIF2AQ9BY44 585 aaKnown RBP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 CELF4Q9BZC1 486 aaKnown RBP15.16■□□□□ 0.02
GPNMB-203ENST00000409458 LACRTQ9GZZ8 138 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 ADAMTS1Q9UHI8 967 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 DNAI1Q9UI46 699 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 CDY2AQ9Y6F7 541 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 CITO14578 2027 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 PHACTR2O75167 634 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 TUBB4AP04350 444 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 TMEM191BP0C7N4 346 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 GRM5P41594 1212 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 ACLYP53396 1101 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 GNG11P61952 73 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 GCNT1Q02742 428 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 KYAT1Q16773 422 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 DUOXA2Q1HG44 320 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 SLC10A6Q3KNW5 377 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 WDR44Q5JSH3 913 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 ZNF710Q8N1W2 664 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 DHX38Q92620 1227 aaKnown RBP15.15■□□□□ 0.02
GPNMB-203ENST00000409458 WDR24Q96S15 920 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 ARID3AQ99856 593 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 SYT11Q9BT88 431 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 HMX1Q9NP08 348 aaPredicted RBP15.15■□□□□ 0.02
GPNMB-203ENST00000409458 NENFQ9UMX5 172 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 R3HCC1Q9Y3T6 440 aaKnown RBP15.15■□□□□ 0.02
GPNMB-203ENST00000409458 TRPV2Q9Y5S1 764 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 MROH7Q68CQ1 1323 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 DNAH12Q6ZR08 3092 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 BRCA2P51587 3418 aa15.15■□□□□ 0.02
GPNMB-203ENST00000409458 DDX3XO00571 662 aaKnown RBP eCLIP15.14■□□□□ 0.01
GPNMB-203ENST00000409458 CST3P01034 146 aaPredicted RBP15.14■□□□□ 0.01
GPNMB-203ENST00000409458 ANXA13P27216 316 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 AXLP30530 894 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 USP8P40818 1118 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 NOP14P78316 857 aaKnown RBP15.14■□□□□ 0.01
GPNMB-203ENST00000409458 POU5F1Q01860 360 aaKnown RBP15.14■□□□□ 0.01
GPNMB-203ENST00000409458 NCBP1Q09161 790 aaKnown RBP15.14■□□□□ 0.01
GPNMB-203ENST00000409458 UMODL1Q5DID0 1318 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 CCDC122Q5T0U0 273 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 JADE1Q6IE81 842 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 FAM228AQ86W67 206 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 FAM71AQ8IYT1 594 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 TMEM130Q8N3G9 435 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 LNX1Q8TBB1 728 aaPredicted RBP15.14■□□□□ 0.01
GPNMB-203ENST00000409458 SH3TC2Q8TF17 1288 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 ANKRD36BP1Q96IX9 119 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 GUCA1BQ9UMX6 200 aa15.14■□□□□ 0.01
GPNMB-203ENST00000409458 PIN4Q9Y237 131 aaKnown RBP15.14■□□□□ 0.01
GPNMB-203ENST00000409458 M0QZ92 97 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 KIF5CO60282 957 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 CABYRO75952 493 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 TNNC2P02585 160 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 CTSHP09668 335 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 CCDC172P0C7W6 258 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 MAGEA1P43355 309 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 MGAT3Q09327 533 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 ITGA7Q13683 1181 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 PTGISQ16647 500 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 ENOSF1Q7L5Y1 443 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 RSPH3Q86UC2 560 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 KIF18AQ8NI77 898 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 SLC20A1Q8WUM9 679 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 ACAP3Q96P50 834 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 TSGA10Q9BZW7 698 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 ASB7Q9H672 318 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 NOC2LQ9Y3T9 749 aaKnown RBP15.13■□□□□ 0.01
GPNMB-203ENST00000409458 NUB1Q9Y5A7 615 aa15.13■□□□□ 0.01
GPNMB-203ENST00000409458 MOXD2PA6NHM9 499 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 CYP26A1O43174 497 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms