RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 LRFN2Q9ULH4 789 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 PTPRJQ12913 1337 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 SMIM28A0A1B0GU29 152 aa22.17■■□□□ 1.14
VSX1-203ENST00000409285 FSD2A1L4K1 749 aa22.17■■□□□ 1.14
VSX1-203ENST00000409285 DLATP10515 647 aaKnown RBP22.17■■□□□ 1.14
VSX1-203ENST00000409285 DEFB103AP81534 67 aa22.17■■□□□ 1.14
VSX1-203ENST00000409285 DCAF17Q5H9S7 520 aaPredicted RBP22.17■■□□□ 1.14
VSX1-203ENST00000409285 MIIPQ5JXC2 388 aa22.17■■□□□ 1.14
VSX1-203ENST00000409285 ZMAT2Q96NC0 199 aaKnown RBP22.17■■□□□ 1.14
VSX1-203ENST00000409285 PPP1R10Q96QC0 940 aaKnown RBP22.17■■□□□ 1.14
VSX1-203ENST00000409285 RPS6KC1Q96S38 1066 aa22.17■■□□□ 1.14
VSX1-203ENST00000409285 GDF15Q99988 308 aa22.17■■□□□ 1.14
VSX1-203ENST00000409285 RC3H2Q9HBD1 1191 aaKnown RBP22.17■■□□□ 1.14
VSX1-203ENST00000409285 INTS13Q9NVM9 706 aa22.17■■□□□ 1.14
VSX1-203ENST00000409285 NFICP08651 508 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 TRIM49P0CI25 452 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 TRIM49CP0CI26 452 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 GRIK3Q13003 919 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 TMEM132DQ14C87 1099 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 JADE1Q6IE81 842 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 SARM1Q6SZW1 724 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 CHRDL2Q6WN34 429 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 C15orf39Q6ZRI6 1047 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 PHOSPHO2Q8TCD6 241 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 FAM212AQ96EL1 285 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 SLC9A7Q96T83 725 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 TMEM117Q9H0C3 514 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 CXCL16Q9H2A7 254 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 SLC38A7Q9NVC3 462 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 KLK14Q9P0G3 267 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 KANSL3Q9P2N6 904 aa22.16■■□□□ 1.14
VSX1-203ENST00000409285 XPOTO43592 962 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 N4BP1O75113 896 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 DGKIO75912 1065 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 AFPP02771 609 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 TPM2P07951 284 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 TNNI1P19237 187 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 CYP3A5P20815 502 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 COPB1P53618 953 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 KCNH2Q12809 1159 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 NAB2Q15742 525 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 DUOXA2Q1HG44 320 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 VWA3BQ502W6 1294 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 TCERG1LQ5VWI1 586 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 HELQQ8TDG4 1101 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 CACTINQ8WUQ7 758 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 MRPL9Q9BYD2 267 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 NDST4Q9H3R1 872 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 CXXC1Q9P0U4 656 aaPredicted RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 UBQLN1Q9UMX0 589 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 GTPBP10A4D1E9 387 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 P4HA2O15460 535 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 THP07101 528 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 FGFR1P11362 822 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 PPP3CAQ08209 521 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 ZACNQ401N2 412 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 NOMO2Q5JPE7 1267 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 CREBRFQ8IUR6 639 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 ABI1Q8IZP0 508 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 URGCPQ8TCY9 931 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 ZNF689Q96CS4 500 aaPredicted RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 KIF12Q96FN5 646 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 POP1Q99575 1024 aaKnown RBP22.15■■□□□ 1.14
VSX1-203ENST00000409285 TMEM8AQ9HCN3 771 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 TAB2Q9NYJ8 693 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 LAMA3Q16787 3333 aa22.15■■□□□ 1.14
VSX1-203ENST00000409285 A0A1B0GTH6 734 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 ZBBXA8MT70 800 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 LGALS16A8MUM7 142 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 BMP8BP34820 402 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 FMO5P49326 533 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 SCNN1GP51170 649 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 AFF1P51825 1210 aaKnown RBP22.14■■□□□ 1.13
VSX1-203ENST00000409285 FANCCQ00597 558 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 OR5B17Q8NGF7 314 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 ZNF516Q92618 1163 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 ANKRD36BP1Q96IX9 119 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 CASD1Q96PB1 797 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 MTMR12Q9C0I1 747 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 PLAGL2Q9UPG8 496 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 COQ4Q9Y3A0 265 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 SLC4A7Q9Y6M7 1214 aa22.14■■□□□ 1.13
VSX1-203ENST00000409285 TRIOBPQ9H2D6 2365 aa22.13■■□□□ 1.13
VSX1-203ENST00000409285 GJB5O95377 273 aa22.13■■□□□ 1.13
VSX1-203ENST00000409285 C4BPAP04003 597 aaKnown RBP22.13■■□□□ 1.13
VSX1-203ENST00000409285 TMEM191BP0C7N4 346 aa22.13■■□□□ 1.13
VSX1-203ENST00000409285 MXI1P50539 228 aa22.13■■□□□ 1.13
VSX1-203ENST00000409285 TFAMQ00059 246 aaKnown RBP22.13■■□□□ 1.13
VSX1-203ENST00000409285 GLRA4Q5JXX5 417 aa22.13■■□□□ 1.13
VSX1-203ENST00000409285 KRT39Q6A163 491 aa22.13■■□□□ 1.13
VSX1-203ENST00000409285 SV2AQ7L0J3 742 aa22.13■■□□□ 1.13
VSX1-203ENST00000409285 UBE2OQ9C0C9 1292 aaKnown RBP22.13■■□□□ 1.13
VSX1-203ENST00000409285 GOLGA6L3A6NEY3 463 aa22.12■■□□□ 1.13
VSX1-203ENST00000409285 SERPINC1P01008 464 aa22.12■■□□□ 1.13
VSX1-203ENST00000409285 TNNC2P02585 160 aa22.12■■□□□ 1.13
VSX1-203ENST00000409285 GCLMP48507 274 aa22.12■■□□□ 1.13
VSX1-203ENST00000409285 HTRA4P83105 476 aaPredicted RBP22.12■■□□□ 1.13
VSX1-203ENST00000409285 DSC1Q08554 894 aa22.12■■□□□ 1.13
VSX1-203ENST00000409285 CBWD6Q4V339 395 aa22.12■■□□□ 1.13
VSX1-203ENST00000409285 CBWD3Q5JTY5 395 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms