RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ECHDC2Q86YB7 292 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 RNF169Q8NCN4 708 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 TAS1R2Q8TE23 839 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 KIF12Q96FN5 646 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 PPP1R9BQ96SB3 815 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 LSM14BQ9BX40 385 aaKnown RBP22.13■■□□□ 1.13
CHKB-201ENST00000406938 FAM207AQ9NSI2 230 aaPredicted RBP22.13■■□□□ 1.13
CHKB-201ENST00000406938 PCDH10Q9P2E7 1040 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 C2CD2Q9Y426 696 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 PON1P27169 355 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 DEKP35659 375 aaKnown RBP22.13■■□□□ 1.13
CHKB-201ENST00000406938 GLRA4Q5JXX5 417 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 VWCEQ96DN2 955 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 ANKRD36BP1Q96IX9 119 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 ZMAT2Q96NC0 199 aaKnown RBP22.13■■□□□ 1.13
CHKB-201ENST00000406938 INTS2Q9H0H0 1204 aaKnown RBP22.13■■□□□ 1.13
CHKB-201ENST00000406938 C1orf112Q9NSG2 853 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 COQ4Q9Y3A0 265 aa22.13■■□□□ 1.13
CHKB-201ENST00000406938 CITO14578 2027 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 TNNC2P02585 160 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 TRIM21P19474 475 aaKnown RBP22.12■■□□□ 1.13
CHKB-201ENST00000406938 MLH1P40692 756 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 APBA1Q02410 837 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 XKR4Q5GH76 650 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 MFSD5Q6N075 450 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 TRIM65Q6PJ69 517 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 AGMOQ6ZNB7 445 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 FAM43BQ6ZT52 329 aaPredicted RBP22.12■■□□□ 1.13
CHKB-201ENST00000406938 ZNF598Q86UK7 904 aaKnown RBP22.12■■□□□ 1.13
CHKB-201ENST00000406938 FBXL13Q8NEE6 735 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 ZFP42Q96MM3 310 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 DERAQ9Y315 318 aa22.12■■□□□ 1.13
CHKB-201ENST00000406938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.12■■□□□ 1.13
CHKB-201ENST00000406938 TET1Q8NFU7 2136 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 EPHB6O15197 1021 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 LRRN2O75325 713 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 VNN1O95497 513 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 GYPCP04921 128 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 ACTN1P12814 892 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 CSF2RAP15509 400 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 TBX2Q13207 712 aaPredicted RBP22.11■■□□□ 1.13
CHKB-201ENST00000406938 TRAPPC11Q7Z392 1133 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 NT5DC4Q86YG4 428 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 C7orf61Q8IZ16 206 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 LMO3Q8TAP4 145 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 SEMA4DQ92854 862 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 PGBD4Q96DM1 585 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 RNF19AQ9NV58 838 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 IMPACTQ9P2X3 320 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 GIT1Q9Y2X7 761 aa22.11■■□□□ 1.13
CHKB-201ENST00000406938 SMIM28A0A1B0GU29 152 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 KCNE1P15382 129 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 PIK3CAP42336 1068 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 FAM189BP81408 668 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 TRIM14Q14142 442 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 DPY19L2P1Q6NXN4 242 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 CNKSR3Q6P9H4 555 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 TMEM199Q8N511 208 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 C1orf127Q8N9H9 656 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 NEK11Q8NG66 645 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 CACTINQ8WUQ7 758 aaKnown RBP22.1■■□□□ 1.13
CHKB-201ENST00000406938 TTYH3Q9C0H2 523 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 RSAD1Q9HA92 442 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 SIX2Q9NPC8 291 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 PLCB1Q9NQ66 1216 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 RAB20Q9NX57 234 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 PRKAG2Q9UGJ0 569 aa22.1■■□□□ 1.13
CHKB-201ENST00000406938 ENPP3O14638 875 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 PHACTR2O75167 634 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 HLA-DRAP01903 254 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 TMEM130Q8N3G9 435 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 EHBP1Q8NDI1 1231 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 GAD1Q99259 594 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 ARL5CA6NH57 179 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 CCDC85CA6NKD9 419 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 GOLGA6L6A8MZA4 724 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 PTGESO14684 152 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 NOL4O94818 638 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 EOMESO95936 686 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 GUCY2FP51841 1108 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 NCOA4Q13772 614 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 ZBTB6Q15916 424 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 FIGNQ5HY92 759 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 SCARA3Q6AZY7 606 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 PPFIBP1Q86W92 1011 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 C18orf25Q96B23 403 aaPredicted RBP22.09■■□□□ 1.13
CHKB-201ENST00000406938 RPS6KC1Q96S38 1066 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 HTATIP2Q9BUP3 242 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 NUP58Q9BVL2 599 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 GANQ9H2C0 597 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.09■■□□□ 1.133e-12■■■■■ 64.6
CHKB-201ENST00000406938 TUBGCP4Q9UGJ1 667 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 PLAGL2Q9UPG8 496 aa22.09■■□□□ 1.13
CHKB-201ENST00000406938 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.08■■□□□ 1.13
CHKB-201ENST00000406938 CASP14P31944 242 aa22.08■■□□□ 1.13
CHKB-201ENST00000406938 AFF1P51825 1210 aaKnown RBP22.08■■□□□ 1.13
CHKB-201ENST00000406938 KLHDC7AQ5VTJ3 777 aa22.08■■□□□ 1.13
CHKB-201ENST00000406938 GSTCDQ8NEC7 633 aa22.08■■□□□ 1.13
CHKB-201ENST00000406938 CPLX3Q8WVH0 158 aa22.08■■□□□ 1.13
CHKB-201ENST00000406938 TSPAN18Q96SJ8 248 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms