RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 GLRA4Q5JXX5 417 aa17.05■□□□□ 0.32
CDPF1-204ENST00000404744 TRIM59Q8IWR1 403 aa17.05■□□□□ 0.32
CDPF1-204ENST00000404744 PHOSPHO2Q8TCD6 241 aa17.05■□□□□ 0.32
CDPF1-204ENST00000404744 RNPC3Q96LT9 517 aaKnown RBP17.05■□□□□ 0.32
CDPF1-204ENST00000404744 FAM193BQ96PV7 902 aaPredicted RBP17.05■□□□□ 0.32
CDPF1-204ENST00000404744 SLC9A7Q96T83 725 aa17.05■□□□□ 0.32
CDPF1-204ENST00000404744 POP1Q99575 1024 aaKnown RBP17.05■□□□□ 0.32
CDPF1-204ENST00000404744 TMEM117Q9H0C3 514 aa17.05■□□□□ 0.32
CDPF1-204ENST00000404744 SLC38A7Q9NVC3 462 aa17.05■□□□□ 0.32
CDPF1-204ENST00000404744 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
CDPF1-204ENST00000404744 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
CDPF1-204ENST00000404744 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.05■□□□□ 0.32
CDPF1-204ENST00000404744 MICAL3Q7RTP6 2002 aa17.05■□□□□ 0.32
CDPF1-204ENST00000404744 TBKBP1A7MCY6 615 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 PHACTR2O75167 634 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 POMCP01189 267 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 AFPP02771 609 aaKnown RBP17.04■□□□□ 0.32
CDPF1-204ENST00000404744 ATP1A3P13637 1013 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 SCNN1GP51170 649 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 DLG4P78352 724 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 KRT31Q15323 416 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 LMBRD2Q68DH5 695 aaPredicted RBP17.04■□□□□ 0.32
CDPF1-204ENST00000404744 BEST2Q8NFU1 509 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 PLEKHO2Q8TD55 490 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 MRPL9Q9BYD2 267 aaKnown RBP17.04■□□□□ 0.32
CDPF1-204ENST00000404744 VPS16Q9H269 839 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 HSD3B7Q9H2F3 369 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 RNF19AQ9NV58 838 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 TAB2Q9NYJ8 693 aa17.04■□□□□ 0.32
CDPF1-204ENST00000404744 LIMA1Q9UHB6 759 aaKnown RBP17.04■□□□□ 0.32
CDPF1-204ENST00000404744 UBQLN1Q9UMX0 589 aaKnown RBP17.04■□□□□ 0.32
CDPF1-204ENST00000404744 N4BP1O75113 896 aaKnown RBP17.03■□□□□ 0.32
CDPF1-204ENST00000404744 DGKIO75912 1065 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 NFICP08651 508 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 ATP2A2P16615 1042 aaKnown RBP17.03■□□□□ 0.32
CDPF1-204ENST00000404744 GTF2H1P32780 548 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 WNT7BP56706 349 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 CETN1Q12798 172 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 KCNH2Q12809 1159 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 GRIK3Q13003 919 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 BIRC3Q13489 604 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 SHHQ15465 462 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 VWA3BQ502W6 1294 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 CRIPAKQ8N1N5 446 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 YME1L1Q96TA2 773 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 GDF15Q99988 308 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 INTS13Q9NVM9 706 aa17.03■□□□□ 0.32
CDPF1-204ENST00000404744 PTGESO14684 152 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 MEFVO15553 781 aaPredicted RBP17.02■□□□□ 0.32
CDPF1-204ENST00000404744 GCLMP48507 274 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 CLDN10P78369 228 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 UVSSAQ2YD98 709 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 PAN2Q504Q3 1202 aaKnown RBP17.02■□□□□ 0.32
CDPF1-204ENST00000404744 C9orf50Q5SZB4 431 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 TMCO2Q7Z6W1 182 aaPredicted RBP17.02■□□□□ 0.32
CDPF1-204ENST00000404744 EFCAB13Q8IY85 973 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 SLC35C1Q96A29 364 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 ZMAT2Q96NC0 199 aaKnown RBP17.02■□□□□ 0.32
CDPF1-204ENST00000404744 CASD1Q96PB1 797 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 CXCL16Q9H2A7 254 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 NDST4Q9H3R1 872 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 MIOSQ9NXC5 875 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 TTC3P53804 2025 aa17.02■□□□□ 0.32
CDPF1-204ENST00000404744 GOLGA6L3A6NEY3 463 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 INPPL1O15357 1258 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 GJB5O95377 273 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 CYP3A5P20815 502 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 GATMP50440 423 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 COPB1P53618 953 aaKnown RBP17.01■□□□□ 0.31
CDPF1-204ENST00000404744 FANCCQ00597 558 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 TRPC3Q13507 836 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 FKBP15Q5T1M5 1219 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 SPOUT1Q5T280 376 aaKnown RBP17.01■□□□□ 0.31
CDPF1-204ENST00000404744 KRT39Q6A163 491 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 GSTCDQ8NEC7 633 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 OR5B17Q8NGF7 314 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 PPP1R10Q96QC0 940 aaKnown RBP17.01■□□□□ 0.31
CDPF1-204ENST00000404744 MTMR12Q9C0I1 747 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 TMEM8AQ9HCN3 771 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 DPP3Q9NY33 737 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 CITO14578 2027 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 LRRC10BA6NIK2 292 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 CLSTN1O94985 981 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 SLC34A2O95436 690 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 TPM3P06753 285 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 KRT19P08727 400 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 FMO5P49326 533 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 MXI1P50539 228 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 AFF1P51825 1210 aaKnown RBP17.01■□□□□ 0.31
CDPF1-204ENST00000404744 MCCD1P59942 119 aaPredicted RBP17.01■□□□□ 0.31
CDPF1-204ENST00000404744 PPP3CAQ08209 521 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 BTG3Q14201 252 aaPredicted RBP17.01■□□□□ 0.31
CDPF1-204ENST00000404744 ZBTB6Q15916 424 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 SV2AQ7L0J3 742 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 TRAPPC11Q7Z392 1133 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 HERC6Q8IVU3 1022 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 LRRC43Q8N309 656 aa17.01■□□□□ 0.31
CDPF1-204ENST00000404744 ZNF516Q92618 1163 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms