RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 HOXA13P31271 388 aaPredicted RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 NSUN6Q8TEA1 469 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PYROXD1Q8WU10 500 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PIK3R5Q8WYR1 880 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PARK7Q99497 189 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 TRIM51Q9BSJ1 452 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 TTYH3Q9C0H2 523 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 BHMT2Q9H2M3 363 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 CNOT8Q9UFF9 292 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PCDHA6Q9UN73 950 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PCDHA8Q9Y5H6 950 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 COL18A1P39060 1754 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 CES2O00748 559 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 HOXD10P28358 340 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 KCNJ2P63252 427 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 ROR2Q01974 943 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 BBS9Q3SYG4 887 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 TLDC1Q6P9B6 456 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 GUF1Q8N442 669 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 DNAAF3Q8N9W5 541 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 C7orf25Q9BPX7 421 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 CALN1Q9BXU9 219 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PITPNM3Q9BZ71 974 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 CELF4Q9BZC1 486 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PABPC3Q9H361 631 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 LAMA4Q16363 1823 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 FAM187AA6NFU0 413 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 SMNDC1O75940 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 DYNLT1P63172 113 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 TFAMQ00059 246 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 BLMHQ13867 455 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 STXBP2Q15833 593 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 DARS2Q6PI48 645 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 ERICH1Q86X53 443 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 DNAJC9Q8WXX5 260 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 RMDN3Q96TC7 470 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 CPVLQ9H3G5 476 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 ABCF3Q9NUQ8 709 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 KBTBD4Q9NVX7 518 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 GAKO14976 1311 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 S100BP04271 92 aaPredicted RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 MX2P20592 715 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PKN1Q16512 942 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 KRT80Q6KB66 452 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 FAM228AQ86W67 206 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 WDR75Q8IWA0 830 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 SRRM1Q8IYB3 904 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 AGGF1Q8N302 714 aaeCLIP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 TTC13Q8NBP0 860 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 HPS3Q969F9 1004 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 CCDC124Q96CT7 223 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 TGS1Q96RS0 853 aaKnown RBP8.56□□□□□ -1.04
LTBP1-202ENST00000404525 TRIM55Q9BYV6 548 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 SMYD2Q9NRG4 433 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 DLGAP2Q9P1A6 1054 aa8.56□□□□□ -1.04
LTBP1-202ENST00000404525 PRPSAP2O60256 369 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 RTN2O75298 545 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 IFRD2Q12894 506 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 TRIP13Q15645 432 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 MIIPQ5JXC2 388 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 KRT39Q6A163 491 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 SLFN12LQ6IEE8 588 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 LONP2Q86WA8 852 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 RGL1Q9NZL6 768 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 NUB1Q9Y5A7 615 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 LAMB4A4D0S4 1761 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 SPDYE16A6NNV3 312 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 O00370 1275 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 TJP3O95049 919 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 PHEXP78562 749 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 SREBF2Q12772 1141 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 APOBEC3HQ6NTF7 200 aaKnown RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 ZNF449Q6P9G9 518 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 ZC3H18Q86VM9 953 aaKnown RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 LDHDQ86WU2 507 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 ERO1BQ86YB8 467 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 SYT2Q8N9I0 419 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 KCTD6Q8NC69 237 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 CCNYQ8ND76 341 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 RBM41Q96IZ5 413 aaKnown RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 MMP19Q99542 508 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 TEX13BQ9BXU2 312 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 UPF3AQ9H1J1 476 aaKnown RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 SLC38A10Q9HBR0 1119 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 MLXIPLQ9NP71 852 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 GPRC5DQ9NZD1 345 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 ORC6Q9Y5N6 252 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 EME2A4GXA9 379 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 LCA5LO95447 670 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 ZNF268Q14587 947 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 C11orf91Q3C1V1 193 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 FAM43BQ6ZT52 329 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 RSPH3Q86UC2 560 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 ST13P4Q8IZP2 240 aaPredicted RBP8.55□□□□□ -1.04
LTBP1-202ENST00000404525 GRAMD1AQ96CP6 724 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 TTC25Q96NG3 672 aa8.55□□□□□ -1.04
LTBP1-202ENST00000404525 LRRC37BQ96QE4 947 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms