RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 GASTP01350 101 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC6A4P31645 630 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 IL12RB1P42701 662 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 GZMKP49863 264 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 AK2P54819 239 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 NPEPPSP55786 919 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 CAP1Q01518 475 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 NFYCQ13952 458 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 PWP2Q15269 919 aaKnown RBP4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 KHDC1LQ5JSQ8 128 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 RNF169Q8NCN4 708 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 LPPQ93052 612 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 IL17RAQ96F46 866 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 NEIL1Q96FI4 390 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 TNIP3Q96KP6 325 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 MRGPRX1Q96LB2 322 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 MRI1Q9BV20 369 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 C11orf54Q9H0W9 315 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 MRPL46Q9H2W6 279 aaKnown RBP4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 KLHL11Q9NVR0 708 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 CALCOCO1Q9P1Z2 691 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 SNX13Q9Y5W8 968 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC4A7Q9Y6M7 1214 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 PNPLA7Q6ZV29 1317 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 NRP1O14786 923 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 TBX3O15119 743 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 NCK2O43639 380 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 CDC14BO60729 498 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 MYF5P13349 255 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 IL2RBP14784 551 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 BRAFP15056 766 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 KCNC1P48547 511 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 SUMO3P55854 103 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 GJA9P57773 515 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 RAC3P60763 192 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 GPSM2P81274 684 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 CREMQ03060 361 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 SP140Q13342 867 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 POLD3Q15054 466 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 GAGE13Q4V321 117 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 GORABQ5T7V8 394 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 TCERG1LQ5VWI1 586 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 ZNF529Q6P280 563 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 FAM90A1Q86YD7 464 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 PLXDC1Q8IUK5 500 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 FAM186BQ8IYM0 893 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 RABGGTAQ92696 567 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 GJA10Q969M2 543 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 ARL8AQ96BM9 186 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 MTFMTQ96DP5 389 aaKnown RBP4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 GNRHR2Q96P88 292 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 MYD88Q99836 296 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 PTPRHQ9HD43 1115 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 FBXO34Q9NWN3 711 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 STK32BQ9NY57 414 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 DMTF1Q9Y222 760 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 DUSP10Q9Y6W6 482 aa4.83□□□□□ -1.64
HMGB1P17-201ENST00000403495 PLEKHD1A6NEE1 506 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 F8W8V4 182 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 MATN4O95460 622 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 ATP5JP18859 108 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 SLC6A2P23975 617 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 FLT3LGP49771 235 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 SOX8P57073 446 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 PSMC1P62191 440 aaKnown RBP4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 NOMO3P69849 1222 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 MRPL49Q13405 166 aaKnown RBP4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 CSRP2Q16527 193 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 CCDC93Q567U6 631 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 C3orf38Q5JPI3 329 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 FAM47AQ5JRC9 791 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 KLHDC7AQ5VTJ3 777 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 C1orf228Q6PIY5 440 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 PDZD4Q76G19 769 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 SESTD1Q86VW0 696 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 FEZF2Q8TBJ5 459 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 BRIX1Q8TDN6 353 aaKnown RBP4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 FBXO41Q8TF61 875 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 CASKIN2Q8WXE0 1202 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 ANKS1AQ92625 1134 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 APIPQ96GX9 242 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 CCDC138Q96M89 665 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 RIPOR3Q96MK2 946 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 LMF1Q96S06 567 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 TCF25Q9BQ70 676 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 PLA2G12BQ9BX93 195 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 NUP62CLQ9H1M0 184 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 MYH16Q9H6N6 1097 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 WDCPQ9H6R7 721 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 SARS2Q9NP81 518 aaKnown RBP4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 NLRC4Q9NPP4 1024 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 JADE2Q9NQC1 790 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 OGDHLQ9ULD0 1010 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
HMGB1P17-201ENST00000403495 PRSS29PA6NIE9 313 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 MYO1FO00160 1098 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 HOXA3O43365 443 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 TRIM13O60858 407 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms