RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 GDF3Q9NR23 364 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 AMACRQ9UHK6 382 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 AGPSO00116 658 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 RNF40O75150 1001 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 HLA-DRAP01903 254 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 GJB1P08034 283 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 GTF2H1P32780 548 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 PIK3CAP42336 1068 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 GTF2A2P52657 109 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL25A1-202ENST00000399127 RHOT2Q8IXI1 618 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 MSL3Q8N5Y2 521 aaKnown RBP12.62□□□□□ -0.39
COL25A1-202ENST00000399127 KRT35Q92764 455 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 VTI1AQ96AJ9 217 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 MMP19Q99542 508 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
COL25A1-202ENST00000399127 BTBD19C9JJ37 291 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 PPP1R12AO14974 1030 aaPredicted RBP12.62□□□□□ -0.39
COL25A1-202ENST00000399127 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
COL25A1-202ENST00000399127 SLC25A27O95847 323 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 TGFB3P10600 412 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
COL25A1-202ENST00000399127 CDR2Q01850 454 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 PSMD6Q15008 389 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 C15orf39Q6ZRI6 1047 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 FAM71BQ8TC56 605 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 ZNF653Q96CK0 615 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 RNPC3Q96LT9 517 aaKnown RBP12.62□□□□□ -0.39
COL25A1-202ENST00000399127 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 GPR20Q99678 358 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 TCHPQ9BT92 498 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 CELF4Q9BZC1 486 aaKnown RBP12.62□□□□□ -0.39
COL25A1-202ENST00000399127 MAF1Q9H063 256 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
COL25A1-202ENST00000399127 MAFO75444 373 aaPredicted RBP12.61□□□□□ -0.39
COL25A1-202ENST00000399127 VNN1O95497 513 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 RFC5P40937 340 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 TNFSF9P41273 254 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 ERVK-9P63128 1117 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 MKRN4PQ13434 485 aaPredicted RBP12.61□□□□□ -0.39
COL25A1-202ENST00000399127 ZACNQ401N2 412 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
COL25A1-202ENST00000399127 CDR2LQ86X02 465 aaPredicted RBP12.61□□□□□ -0.39
COL25A1-202ENST00000399127 RASGEF1CQ8N431 466 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 BRI3BPQ8WY22 251 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
COL25A1-202ENST00000399127 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 NUP85Q9BW27 656 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 FAM204AQ9H8W3 233 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 STYXL1Q9Y6J8 313 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 UMODL1Q5DID0 1318 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 A0A0B4J269 797 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 ADCY3O60266 1144 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 C4BPAP04003 597 aaKnown RBP12.61□□□□□ -0.39
COL25A1-202ENST00000399127 GZMAP12544 262 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 LMAN1P49257 510 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 AARSP49588 968 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL25A1-202ENST00000399127 FKBP1BP68106 108 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 GCNT1Q02742 428 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL25A1-202ENST00000399127 LLGL1Q15334 1064 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 WDR44Q5JSH3 913 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 CST9Q5W186 159 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 LLGL2Q6P1M3 1020 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 EMBQ6PCB8 327 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 RNF149Q8NC42 400 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 PPM1EQ8WY54 764 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 RUBCNQ92622 972 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 KIAA1586Q9HCI6 787 aa12.61□□□□□ -0.39
COL25A1-202ENST00000399127 LRRC37A2A6NM11 1700 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 ZBTB42B2RXF5 422 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 CLDN3O15551 220 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 TTI1O43156 1089 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 COMTP21964 271 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 HUNKP57058 714 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 LAMTOR4Q0VGL1 99 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 CELF3Q5SZQ8 465 aaKnown RBP12.6□□□□□ -0.39
COL25A1-202ENST00000399127 MMS22LQ6ZRQ5 1243 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 RPAINQ86UA6 219 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 RHPN2Q8IUC4 686 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 ZNF564Q8TBZ8 553 aaPredicted RBP12.6□□□□□ -0.39
COL25A1-202ENST00000399127 AFAP1L1Q8TED9 768 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 CPA5Q8WXQ8 436 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 APOBEC3GQ9HC16 384 aaKnown RBP12.6□□□□□ -0.39
COL25A1-202ENST00000399127 ERVK-5Q9HDB9 667 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 TRPC6Q9Y210 931 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 CFHP08603 1231 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 TXNP10599 105 aaKnown RBP12.6□□□□□ -0.39
COL25A1-202ENST00000399127 TNFRSF8P28908 595 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 CLDN10P78369 228 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 PAK2Q13177 524 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 BIRC2Q13490 618 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 SPRYD7Q5W111 196 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 SLFN12LQ6IEE8 588 aa12.6□□□□□ -0.39
COL25A1-202ENST00000399127 PASD1Q8IV76 773 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms