RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 PPP1R12CQ9BZL4 782 aa9.65□□□□□ -0.86
SEC24A-202ENST00000398844 A0A0G2JND7 137 aa9.65□□□□□ -0.86
SEC24A-202ENST00000398844 ITGA8P53708 1063 aa9.65□□□□□ -0.86
SEC24A-202ENST00000398844 SPOUT1Q5T280 376 aaKnown RBP9.65□□□□□ -0.86
SEC24A-202ENST00000398844 EFCAB12Q6NXP0 572 aa9.65□□□□□ -0.86
SEC24A-202ENST00000398844 DNAJC19Q96DA6 116 aa9.65□□□□□ -0.86
SEC24A-202ENST00000398844 ECT2Q9H8V3 914 aa9.65□□□□□ -0.86
SEC24A-202ENST00000398844 TMEM8AQ9HCN3 771 aa9.65□□□□□ -0.86
SEC24A-202ENST00000398844 FNDC3AQ9Y2H6 1198 aaKnown RBP9.65□□□□□ -0.86
SEC24A-202ENST00000398844 TCP11X1B4DZS4 312 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 SUN1O94901 812 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 SNX16P57768 344 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 AP1B1Q10567 949 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 NEDD9Q14511 834 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 WDR72Q3MJ13 1102 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 KCNT1Q5JUK3 1230 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 SYTL5Q8TDW5 730 aaPredicted RBP9.65□□□□□ -0.87
SEC24A-202ENST00000398844 ZBTB45Q96K62 511 aaPredicted RBP9.65□□□□□ -0.87
SEC24A-202ENST00000398844 C9orf72Q96LT7 481 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 KCNMB3Q9NPA1 279 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 DCTN4Q9UJW0 460 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 CCDC78A2IDD5 438 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 OATP04181 439 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 RALAP11233 206 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 KRT10P13645 584 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 PCNX4Q63HM2 1172 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 RWDD4Q6NW29 188 aaKnown RBP9.65□□□□□ -0.87
SEC24A-202ENST00000398844 CROCCP2Q86T23 111 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 IRF2BP1Q8IU81 584 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 TAS1R2Q8TE23 839 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 SLC13A1Q9BZW2 595 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 C10orf88Q9H8K7 445 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 FAM49BQ9NUQ9 324 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 FBXO40Q9UH90 709 aa9.65□□□□□ -0.87
SEC24A-202ENST00000398844 MIF4GDA9UHW6 222 aaKnown RBP9.64□□□□□ -0.87
SEC24A-202ENST00000398844 EXTL3O43909 919 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 TMEM253P0C7T8 217 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 ANKRD20A3Q5VUR7 823 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 SH3BP5LQ7L8J4 393 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 ZSWIM2Q8NEG5 633 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 HVCN1Q96D96 273 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 TJP1Q07157 1748 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 EIF3HO15372 352 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEC24A-202ENST00000398844 ZBED1O96006 694 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 MT-ND3P03897 115 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 ZNF286BP0CG31 522 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 NFX1Q12986 1120 aaKnown RBP9.64□□□□□ -0.87
SEC24A-202ENST00000398844 CENPUQ71F23 418 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 LRRC15Q8TF66 581 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 TRAPPC12Q8WVT3 735 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 LPAR1Q92633 364 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 SYN2Q92777 582 aaPredicted RBP9.64□□□□□ -0.87
SEC24A-202ENST00000398844 SLITRK6Q9H5Y7 841 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 CNOT10Q9H9A5 744 aaKnown RBP9.64□□□□□ -0.87
SEC24A-202ENST00000398844 POLIQ9UNA4 740 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 HOXA7P31268 230 aaPredicted RBP9.64□□□□□ -0.87
SEC24A-202ENST00000398844 PBX1P40424 430 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 LMNB2Q03252 620 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 KIF22Q14807 665 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 SLC35G1Q2M3R5 365 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 GLRA4Q5JXX5 417 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 GPAT2Q6NUI2 795 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 CREG2Q8IUH2 290 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 SCYL3Q8IZE3 742 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 C4orf33Q8N1A6 199 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 KLF6Q99612 283 aaPredicted RBP9.64□□□□□ -0.87
SEC24A-202ENST00000398844 ISCUQ9H1K1 167 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 ITGB4P16144 1822 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 SPATA31C1P0DKV0 1188 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 MYH6P13533 1939 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 CA4P22748 312 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 RHOT1Q8IXI2 618 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 SLC5A5Q92911 643 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 DDX23Q9BUQ8 820 aaKnown RBP9.64□□□□□ -0.87
SEC24A-202ENST00000398844 EPN3Q9H201 632 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 MYH7P12883 1935 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 CYP11B1P15538 503 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 SLC29A2Q14542 456 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 TTLL4Q14679 1199 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 KLK14Q9P0G3 267 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 AGAP1Q9UPQ3 857 aa9.64□□□□□ -0.87
SEC24A-202ENST00000398844 MYH3P11055 1940 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 TXNDC9O14530 226 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 PHKA2P46019 1235 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 NOP14P78316 857 aaKnown RBP9.63□□□□□ -0.87
SEC24A-202ENST00000398844 RAB3IPQ96QF0 476 aaPredicted RBP9.63□□□□□ -0.87
SEC24A-202ENST00000398844 RIT2Q99578 217 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 TEX13BQ9BXU2 312 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 AP5M1Q9H0R1 490 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 CAND2O75155 1236 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 ITGB3P05106 788 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 COILP38432 576 aaPredicted RBP9.63□□□□□ -0.87
SEC24A-202ENST00000398844 EIF3BP55884 814 aaKnown RBP9.63□□□□□ -0.87
SEC24A-202ENST00000398844 CACNB2Q08289 660 aaPredicted RBP9.63□□□□□ -0.87
SEC24A-202ENST00000398844 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 SEPT6Q14141 434 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 PSMD6Q15008 389 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 DNAAF3Q8N9W5 541 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 OR6J1Q8NGC5 347 aa9.63□□□□□ -0.87
SEC24A-202ENST00000398844 LNX1Q8TBB1 728 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms