RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 EPHB1P54762 984 aa13.16□□□□□ -0.3
SOCS6-201ENST00000397942 RPAINQ86UA6 219 aa13.16□□□□□ -0.3
SOCS6-201ENST00000397942 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
SOCS6-201ENST00000397942 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
SOCS6-201ENST00000397942 POLRMTO00411 1230 aaKnown RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 FOXP2O15409 715 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 CST8O60676 142 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 ZWINTO95229 277 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 FUT2Q10981 343 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 DRP2Q13474 957 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 PRAMEF18Q5VWM3 479 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 NUDCD3Q8IVD9 361 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 VPS39Q96JC1 886 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 ZSWIM1Q9BR11 485 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 TRAF3IP3Q9Y228 551 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 KLRC4O43908 158 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 RALAP11233 206 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 RAB6BQ9NRW1 208 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 HAUS2Q9NVX0 235 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 PPP1R9AQ9ULJ8 1098 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 MAP2K7O14733 419 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 ACTR2P61160 394 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 CDR2Q01850 454 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 PRKCEQ02156 737 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 EVX2Q03828 476 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 HEATR6Q6AI08 1181 aaKnown RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 IRF2BP1Q8IU81 584 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 TAS1R2Q8TE23 839 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 TAAR1Q96RJ0 339 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 NUDCD1Q96RS6 583 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 MID2Q9UJV3 735 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 APOBEC2Q9Y235 224 aaKnown RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 FNDC3AQ9Y2H6 1198 aaKnown RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 GTPBP10A4D1E9 387 aaKnown RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 FAM47DPA6NHR8 397 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 F8VZ95 297 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 SHMT1P34896 483 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 COILP38432 576 aaPredicted RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 AP3M2P53677 418 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 EIF3EP60228 445 aaKnown RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 GPR162Q16538 588 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 SV2AQ7L0J3 742 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 TRPM8Q7Z2W7 1104 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 KCNV2Q8TDN2 545 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 KLF6Q99612 283 aaPredicted RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 SENP7Q9BQF6 1050 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 TPX2Q9ULW0 747 aaKnown RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 FIS1Q9Y3D6 152 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 WEE2P0C1S8 567 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 GRIK5Q16478 980 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 DEPDC1BQ8WUY9 529 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 ATG4AQ8WYN0 398 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 TTC1Q99614 292 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 ROPN1BQ9BZX4 212 aaPredicted RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 ROPN1Q9HAT0 212 aaPredicted RBP13.15□□□□□ -0.3
SOCS6-201ENST00000397942 JCADQ9P266 1359 aa13.15□□□□□ -0.3
SOCS6-201ENST00000397942 EPHB6O15197 1021 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 MAGEA4P43358 317 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 ERFP50548 548 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 SMAD1Q15797 465 aaKnown RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 CDR2LQ86X02 465 aaPredicted RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 ACTRT1Q8TDG2 376 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 FOXP3Q9BZS1 431 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 HUS1O60921 280 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 SRGAP2BP0DMP2 458 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 RARGP13631 454 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 RRM1P23921 792 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 TYK2P29597 1187 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 ITGA8P53708 1063 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 DDX4Q9NQI0 724 aaKnown RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 DDX56Q9NY93 547 aaKnown RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 PRKCBP05771 671 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 SYDE1Q6ZW31 735 aaPredicted RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 RCOR2Q8IZ40 523 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 GMCL1Q96IK5 515 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 VCX3AQ9NNX9 186 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 CNOT7Q9UIV1 285 aaKnown RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 CCT8L1PA6NM43 557 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 TNFAIP2Q03169 654 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 SYCP2LQ5T4T6 812 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 ERP27Q96DN0 273 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 FAM167BQ9BTA0 163 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 MOV10L1Q9BXT6 1211 aaKnown RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 WDR35Q9P2L0 1181 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 AGAP1Q9UPQ3 857 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 SMG5Q9UPR3 1016 aaKnown RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 MST1RQ04912 1400 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
SOCS6-201ENST00000397942 TWF2Q6IBS0 349 aaKnown RBP13.14□□□□□ -0.31
SOCS6-201ENST00000397942 KDM7AQ6ZMT4 941 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms