RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 SDR42E1Q8WUS8 393 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 SPIRE2Q8WWL2 714 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 GLG1Q92896 1179 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 GANQ9H2C0 597 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 GOLPH3Q9H4A6 298 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 UBN1Q9NPG3 1134 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 NR2E1Q9Y466 385 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 FAM47DPA6NHR8 397 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 TPD52L2O43399 206 aaKnown RBP12.23□□□□□ -0.45
PUM3-202ENST00000397885 EDF1O60869 148 aaKnown RBP12.23□□□□□ -0.45
PUM3-202ENST00000397885 SUPT3HO75486 399 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 PLEKHA8P1O95397 391 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 SCG2P13521 617 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 CREB1P16220 341 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 TXKP42681 527 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
PUM3-202ENST00000397885 NR1H3Q13133 447 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 CTC1Q2NKJ3 1217 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 CERKLQ49MI3 558 aaPredicted RBP12.23□□□□□ -0.45
PUM3-202ENST00000397885 OLFML2BQ68BL8 750 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 C3orf62Q6ZUJ4 267 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 OTUD6AQ7L8S5 288 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 ZNF571Q7Z3V5 609 aaPredicted RBP12.23□□□□□ -0.45
PUM3-202ENST00000397885 BHMT2Q9H2M3 363 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 SH3GLB2Q9NR46 395 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 SYNGAP1Q96PV0 1343 aa12.23□□□□□ -0.45
PUM3-202ENST00000397885 TMEM247A6NEH6 219 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 A6NJR5 290 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 VARSP26640 1264 aaKnown RBP12.22□□□□□ -0.45
PUM3-202ENST00000397885 RAP1GDS1P52306 607 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 XIAPP98170 497 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 GSTM4Q03013 218 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 HSP90AA5PQ58FG0 334 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 CLNKQ7Z7G1 428 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 CROCCP3Q8IVE0 287 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 LRRC15Q8TF66 581 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 FAM81BQ96LP2 452 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 FNBP1Q96RU3 617 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 RTFDC1Q9BY42 306 aaPredicted RBP12.22□□□□□ -0.45
PUM3-202ENST00000397885 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 FAIMQ9NVQ4 179 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 CNTNAP5Q8WYK1 1306 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 FAM196BA6NMK8 535 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 PP2D1A8MPX8 630 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 CDH16O75309 829 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 ALOX15P16050 662 aaPredicted RBP12.22□□□□□ -0.45
PUM3-202ENST00000397885 CTNNA2P26232 953 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 HOXD12P35452 270 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 TROAPQ12815 778 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
PUM3-202ENST00000397885 IZUMO2Q6UXV1 221 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 DPP8Q6V1X1 898 aaPredicted RBP12.22□□□□□ -0.45
PUM3-202ENST00000397885 ADGRG6Q86SQ4 1221 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 BLIDQ8IZY5 108 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 GPC2Q8N158 579 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 ERMNQ8TAM6 284 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 UHMK1Q8TAS1 419 aaKnown RBP12.22□□□□□ -0.45
PUM3-202ENST00000397885 MCUR1Q96AQ8 359 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 CDC42EP4Q9H3Q1 356 aaKnown RBP12.22□□□□□ -0.45
PUM3-202ENST00000397885 CYLDQ9NQC7 956 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
PUM3-202ENST00000397885 NR2E3Q9Y5X4 410 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 NCANO14594 1321 aa12.22□□□□□ -0.45
PUM3-202ENST00000397885 SNAP23O00161 211 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 GYG2O15488 501 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 VCAM1P19320 739 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 NEK3P51956 506 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 EMP3P54852 163 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 PDE1BQ01064 536 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 ARID5AQ03989 594 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.45
PUM3-202ENST00000397885 SPARCL1Q14515 664 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 PDK4Q16654 411 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 DCAF12L1Q5VU92 463 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 NIM1KQ8IY84 436 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 ZBED8Q8IZ13 594 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 NUP93Q8N1F7 819 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 ATP11CQ8NB49 1132 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 ABTB1Q969K4 478 aaPredicted RBP12.21□□□□□ -0.45
PUM3-202ENST00000397885 PTCD3Q96EY7 689 aaKnown RBP12.21□□□□□ -0.45
PUM3-202ENST00000397885 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 LRRC27Q9C0I9 530 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 TSPYL2Q9H2G4 693 aaPredicted RBP12.21□□□□□ -0.45
PUM3-202ENST00000397885 ERVK-5Q9HDB9 667 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 MLXIPLQ9NP71 852 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 TMOD4Q9NZQ9 345 aa12.21□□□□□ -0.45
PUM3-202ENST00000397885 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 NDC80O14777 642 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 EXOC3O60645 756 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 MAGEC1O60732 1142 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 CDK4P11802 303 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 PPATQ06203 517 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 CHRNDQ07001 517 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 CALCOCO2Q13137 446 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 CYP1B1Q16678 543 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 FAM47EQ6ZV65 393 aa12.21□□□□□ -0.46
PUM3-202ENST00000397885 EPM2AIP1Q7L775 607 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms