RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 PARP2Q9UGN5 583 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 LIMA1Q9UHB6 759 aaKnown RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 CNTNAP2Q9UHC6 1331 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 SIP14410 1827 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 ENPP3O14638 875 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 MAPK13O15264 365 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 TIMP1P01033 207 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 TPM3P06753 285 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 CLTAP09496 248 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 TNNI1P19237 187 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 ABL2P42684 1182 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 VAMP7P51809 220 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 COPB1P53618 953 aaKnown RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 YARSP54577 528 aaKnown RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 UBXN1Q04323 297 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 PPP2R3AQ06190 1150 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 RBL2Q08999 1139 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 NR1I3Q14994 352 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 SURF1Q15526 300 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 DCAF4L1Q3SXM0 396 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 VWA3BQ502W6 1294 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 TRAF7Q6Q0C0 670 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 CRELD2Q6UXH1 353 aaPredicted RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 INTS8Q75QN2 995 aaKnown RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 DEFB128Q7Z7B8 93 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 USP37Q86T82 979 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 CBWD2Q8IUF1 395 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 SCUBE3Q8IX30 993 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 DRC7Q8IY82 874 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 HACE1Q8IYU2 909 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 RPUSD2Q8IZ73 545 aaKnown RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 DBF4BQ8NFT6 615 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 CCDC51Q96ER9 411 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 MFSD14AQ96MC6 490 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 FBXL18Q96ME1 805 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 NAP1L5Q96NT1 182 aaPredicted RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 ADAM2Q99965 735 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 CCDC94Q9BW85 323 aaPredicted RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 APOL6Q9BWW8 343 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 EIF2AQ9BY44 585 aaKnown RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 CDT1Q9H211 546 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 SNTG2Q9NY99 539 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 TAB2Q9NYJ8 693 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 PCDHB2Q9Y5E7 798 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 MYH11P35749 1972 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 NLRC5Q86WI3 1866 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 RANBP2P49792 3224 aaKnown RBP8.27□□□□□ -1.09
LINC00887-201ENST00000397644 UMODL1Q5DID0 1318 aa8.27□□□□□ -1.09
LINC00887-201ENST00000397644 TRIM43BA6NCK2 446 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 POM121CA8CG34 1229 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 LACTBL1A8MY62 500 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 SOX1O00570 391 aaPredicted RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 ABLIM1O14639 778 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 KIAA0355O15063 1070 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 STX10O60499 249 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 NBNO60934 754 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 AP1G2O75843 785 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 ADCY5O95622 1261 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 S1PR4O95977 384 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 AFPP02771 609 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 DLATP10515 647 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 SKIP12755 728 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 ITGA4P13612 1032 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 AKAP5P24588 427 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 TNFSF9P41273 254 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 GRM5P41594 1212 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 CYP24A1Q07973 514 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 KCNH2Q12809 1159 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 MBTPS1Q14703 1052 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 MAN2A1Q16706 1144 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 DCAF17Q5H9S7 520 aaPredicted RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 ZBTB41Q5SVQ8 909 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 UBXN11Q5T124 520 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 FKBP15Q5T1M5 1219 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 FAM43BQ6ZT52 329 aaPredicted RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 RTN4RL1Q86UN2 441 aaPredicted RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 TRIM59Q8IWR1 403 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 TMEM199Q8N511 208 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 PARD3BQ8TEW8 1205 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 CACTINQ8WUQ7 758 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 TRIM43Q96BQ3 446 aaPredicted RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 PGBD4Q96DM1 585 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 BORCS6Q96GS4 357 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 CALR3Q96L12 384 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 POP1Q99575 1024 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 FTHL17Q9BXU8 183 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 XPO4Q9C0E2 1151 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 PRO3102Q9H379 93 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 TMX1Q9H3N1 280 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 NDST4Q9H3R1 872 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 MMRN2Q9H8L6 949 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 RBAKQ9NYW8 714 aaPredicted RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 CPSF3Q9UKF6 684 aaKnown RBP8.26□□□□□ -1.09
LINC00887-201ENST00000397644 TBX21Q9UL17 535 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 ARID2Q68CP9 1835 aa8.26□□□□□ -1.09
LINC00887-201ENST00000397644 MICAL3Q7RTP6 2002 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms