RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 FAM173BQ6P4H8 233 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.23■□□□□ 0.03
SEC13-204ENST00000397099 RTL10Q7L3V2 364 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 ZBTB33Q86T24 672 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 CD302Q8IX05 232 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 PIK3R5Q8WYR1 880 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 EDAQ92838 391 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 PYM1Q9BRP8 204 aaKnown RBP15.23■□□□□ 0.03
SEC13-204ENST00000397099 GPR62Q9BZJ7 368 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 ZHX3Q9H4I2 956 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 ANKFY1Q9P2R3 1169 aa15.23■□□□□ 0.03
SEC13-204ENST00000397099 ARIH1Q9Y4X5 557 aaPredicted RBP15.23■□□□□ 0.03
SEC13-204ENST00000397099 TEX28O15482 410 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 CUTAO60888 179 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 B3GAT3O94766 335 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 KIF4AO95239 1232 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 F13A1P00488 732 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 EPCAMP16422 314 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 UPP1Q16831 310 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 SPECC1Q5M775 1068 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 RARS2Q5T160 578 aaKnown RBP15.22■□□□□ 0.03
SEC13-204ENST00000397099 FAM171A1Q5VUB5 890 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 HFE2Q6ZVN8 426 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 TAS1R1Q7RTX1 841 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 MAP4K3Q8IVH8 894 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 RIN2Q8WYP3 895 aaPredicted RBP15.22■□□□□ 0.03
SEC13-204ENST00000397099 DDX12PQ92771 950 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 MFSD14AQ96MC6 490 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 CLIC6Q96NY7 704 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 MAGEF1Q9HAY2 307 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 OLFML3Q9NRN5 406 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 EXOC7Q9UPT5 735 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 USTQ9Y2C2 406 aa15.22■□□□□ 0.03
SEC13-204ENST00000397099 OGTO15294 1046 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 PAPLNO95428 1278 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 CLCNKBP51801 687 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 OSTNP61366 133 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
SEC13-204ENST00000397099 PPP2R3AQ06190 1150 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 POSTNQ15063 836 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 GPR149Q86SP6 731 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 C12orf76Q8N812 135 aaPredicted RBP15.21■□□□□ 0.03
SEC13-204ENST00000397099 IQUBQ8NA54 791 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 ZDHHC7Q9NXF8 308 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 CDH22Q9UJ99 828 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
SEC13-204ENST00000397099 A0A0B4J269 797 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 TMEM221A6NGB7 291 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 M0R296 226 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 WEE2P0C1S8 567 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 HARSP12081 509 aaKnown RBP15.2■□□□□ 0.02
SEC13-204ENST00000397099 CYP3A5P20815 502 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 ZXDAP98168 799 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 PSMD5Q16401 504 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 GLRA4Q5JXX5 417 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 ANKS3Q6ZW76 656 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 STXBP4Q6ZWJ1 553 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 ZNF720Q7Z2F6 126 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 CCDC65Q8IXS2 484 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 CEP120Q8N960 986 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 LRRC15Q8TF66 581 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 STAMQ92783 540 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 ZBTB45Q96K62 511 aaPredicted RBP15.2■□□□□ 0.02
SEC13-204ENST00000397099 FIZ1Q96SL8 496 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 PAAF1Q9BRP4 392 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 POMKQ9H5K3 350 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 MRPL44Q9H9J2 332 aaKnown RBP15.2■□□□□ 0.02
SEC13-204ENST00000397099 RPF1Q9H9Y2 349 aaKnown RBP15.2■□□□□ 0.02
SEC13-204ENST00000397099 MAN1C1Q9NR34 630 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 ATP6V1DQ9Y5K8 247 aa15.2■□□□□ 0.02
SEC13-204ENST00000397099 PLXNA3P51805 1871 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 TTC26A0AVF1 554 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 F8W810 466 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 PODXLO00592 558 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 SYN3O14994 580 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 ADRB2P07550 413 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 FGFR3P22607 806 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 SLC10A6Q3KNW5 377 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 KANK3Q6NY19 840 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 TRIM67Q6ZTA4 783 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 OTOP3Q7RTS5 596 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 DYMQ7RTS9 669 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 CEP57Q86XR8 500 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 LNX1Q8TBB1 728 aaPredicted RBP15.19■□□□□ 0.02
SEC13-204ENST00000397099 PBXIP1Q96AQ6 731 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 ACSF2Q96CM8 615 aaPredicted RBP15.19■□□□□ 0.02
SEC13-204ENST00000397099 DNAJC19Q96DA6 116 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 MSTO1Q9BUK6 570 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 OXCT2Q9BYC2 517 aaPredicted RBP15.19■□□□□ 0.02
SEC13-204ENST00000397099 FAM13BQ9NYF5 915 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 UBQLN1Q9UMX0 589 aaKnown RBP15.19■□□□□ 0.02
SEC13-204ENST00000397099 DERAQ9Y315 318 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 NUB1Q9Y5A7 615 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 BACE2Q9Y5Z0 518 aa15.19■□□□□ 0.02
SEC13-204ENST00000397099 DENND4AQ7Z401 1863 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 ARHGEF37A1IGU5 675 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 FRMD3A2A2Y4 597 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms