RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 PDCP20941 246 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 STRN3Q13033 797 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 FEZF2Q8TBJ5 459 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 PIK3R5Q8WYR1 880 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 RABGGTAQ92696 567 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 STAMQ92783 540 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 CALML4Q96GE6 196 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 B3GALT6Q96L58 329 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 PNMA5Q96PV4 448 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 PPP1R10Q96QC0 940 aaKnown RBP13.24□□□□□ -0.29
GAPDH-202ENST00000396856 TTPALQ9BTX7 342 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 MFSD1Q9H3U5 465 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 PTPRHQ9HD43 1115 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 SLC38A7Q9NVC3 462 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 ZDHHC7Q9NXF8 308 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 R4GN57 208 aa13.24□□□□□ -0.29
GAPDH-202ENST00000396856 SPTBN2O15020 2390 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 USP24Q9UPU5 2620 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 TGM5O43548 720 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 PAPLNO95428 1278 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 PLA2G4BP0C869 781 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 MCF2P10911 925 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 SCP2P22307 547 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 UBA7P41226 1012 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 SLC12A3P55017 1021 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 CUL4AQ13619 759 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 TMEM119Q4V9L6 283 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 FAM171A1Q5VUB5 890 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 LILRA6Q6PI73 481 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 MPZL3Q6UWV2 235 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 CEP57Q86XR8 500 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 PALB2Q86YC2 1186 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 DCLK2Q8N568 766 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 HASPINQ8TF76 798 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 RTP3Q9BQQ7 232 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 TCHPQ9BT92 498 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 TARS2Q9BW92 718 aaKnown RBP13.23□□□□□ -0.29
GAPDH-202ENST00000396856 CDT1Q9H211 546 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 WDR6Q9NNW5 1121 aaKnown RBP13.23□□□□□ -0.29
GAPDH-202ENST00000396856 LARSQ9P2J5 1176 aaKnown RBP13.23□□□□□ -0.29
GAPDH-202ENST00000396856 CACNG4Q9UBN1 327 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 GPR179Q6PRD1 2367 aa13.23□□□□□ -0.29
GAPDH-202ENST00000396856 MAP1BP46821 2468 aaKnown RBP13.22□□□□□ -0.29
GAPDH-202ENST00000396856 CHD8Q9HCK8 2581 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 SMIM28A0A1B0GU29 152 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 SFI1A8K8P3 1242 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 SLC16A4O15374 487 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 TRAPPC3O43617 180 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 TOM1L1O75674 476 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 B3GAT3O94766 335 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 PROZP22891 400 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
GAPDH-202ENST00000396856 PSMD5Q16401 504 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 XKR4Q5GH76 650 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 GLRA4Q5JXX5 417 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 DCLRE1AQ6PJP8 1040 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 PRSS55Q6UWB4 352 aaPredicted RBP13.22□□□□□ -0.29
GAPDH-202ENST00000396856 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 ZPBP2Q6X784 338 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.22□□□□□ -0.29
GAPDH-202ENST00000396856 TAS1R3Q7RTX0 852 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 SUMF1Q8NBK3 374 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 TMEM161BQ8NDZ6 487 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 SMG7Q92540 1137 aaKnown RBP13.22□□□□□ -0.29
GAPDH-202ENST00000396856 DDX27Q96GQ7 796 aaKnown RBP13.22□□□□□ -0.29
GAPDH-202ENST00000396856 ACAP3Q96P50 834 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 PLIN2Q99541 437 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 ODF2LQ9ULJ1 636 aa13.22□□□□□ -0.29
GAPDH-202ENST00000396856 CLUHO75153 1309 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 RPL17P18621 184 aaKnown RBP13.21□□□□□ -0.29
GAPDH-202ENST00000396856 CLCNKBP51801 687 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 OSTNP61366 133 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.29
GAPDH-202ENST00000396856 UPP1Q16831 310 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 CEP120Q8N960 986 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 RASSF8Q8NHQ8 419 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 LNX1Q8TBB1 728 aaPredicted RBP13.21□□□□□ -0.29
GAPDH-202ENST00000396856 KCNG4Q8TDN1 519 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 KCNN1Q92952 543 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 CLSTN3Q9BQT9 956 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 PRKD2Q9BZL6 878 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 CXCL16Q9H2A7 254 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 PIDD1Q9HB75 910 aa13.21□□□□□ -0.29
GAPDH-202ENST00000396856 DENND4AQ7Z401 1863 aa13.21□□□□□ -0.3
GAPDH-202ENST00000396856 FANCMQ8IYD8 2048 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-202ENST00000396856 KRBA1A5PL33 1030 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 ABLIM1O14639 778 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 CLDN3O15551 220 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 RFPL2O75678 378 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 ZMYND10O75800 440 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 HNRNPA1P09651 372 aaKnown RBP eCLIP13.2□□□□□ -0.3
GAPDH-202ENST00000396856 SPATA31D3P0C874 917 aa13.2□□□□□ -0.3
GAPDH-202ENST00000396856 MAPTP10636 758 aaKnown RBP13.2□□□□□ -0.3
GAPDH-202ENST00000396856 KCNE1P15382 129 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms