RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LRRC74BQ6ZQY2 392 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 APLFQ8IW19 511 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 SRBD1Q8N5C6 995 aaKnown RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 CALML6Q8TD86 181 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 RNF41Q9H4P4 317 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 PLEKHA5Q9HAU0 1116 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 PCDH12Q9NPG4 1184 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 GPRC5DQ9NZD1 345 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 NDC80O14777 642 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 TTI1O43156 1089 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 MAP3K13O43283 966 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 TJP3O95049 919 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 FGRP09769 529 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 TFPTP0C1Z6 253 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 P4HA1P13674 534 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 COPB2P35606 906 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 IFI35P80217 286 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 KCNMA1Q12791 1236 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 LIN52Q52LA3 116 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 ICA1LQ8NDH6 482 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 MAML1Q92585 1016 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 PAGE5Q96GU1 130 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 L3MBTL3Q96JM7 780 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 NOL6Q9H6R4 1146 aaKnown RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 HEY1Q9Y5J3 304 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 LTBP3Q9NS15 1303 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 TMEM120BA0PK00 339 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 GSTT2P0CG29 244 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 GSTT2BP0CG30 244 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 CCDC166P0CW27 439 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 CYP2D6P10635 497 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 DRD4P21917 467 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 PBX1P40424 430 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 CD151P48509 253 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 RTP1P59025 263 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 AP2B1P63010 937 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 WASHC5Q12768 1159 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 PPP2R5BQ15173 497 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 IFIT1BQ5T764 474 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 PLEKHA7Q6IQ23 1121 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 ARHGEF18Q6ZSZ5 1173 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 CATIPQ7Z7H3 387 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 TBATAQ96M53 351 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 TUBGCP2Q9BSJ2 902 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 SLC7A5P2Q9GIP4 190 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 FAM192AQ9GZU8 254 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 NPHS2Q9NP85 383 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 ATAD3AQ9NVI7 634 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 CYP39A1Q9NYL5 469 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 TUBGCP4Q9UGJ1 667 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 ADAMTS1Q9UHI8 967 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 BCAP29Q9UHQ4 241 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 MINPP1Q9UNW1 487 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 SSX2IPQ9Y2D8 614 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 RSPH10B2B2RC85 870 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 USP17L12C9JPN9 530 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 USP17L21D6R901 530 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 RSPH10BP0C881 870 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 EEF1B2P24534 225 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 PRDX5P30044 214 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 HALP42357 657 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 STAT2P52630 851 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 RHBDL3P58872 404 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 PLCB3Q01970 1234 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 ASPHQ12797 758 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 PDIA5Q14554 519 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 FAM47AQ5JRC9 791 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 MARK2Q7KZI7 788 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 ZFAND2BQ8WV99 257 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 CRAMP1Q96RY5 1269 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 FAM129AQ9BZQ8 928 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 TRPC7Q9HCX4 862 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 CNOT8Q9UFF9 292 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.92□□□□□ -0.986e-6■■□□□ 13.9
NDE1-202ENST00000396355 CCDC88AQ3V6T2 1871 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 PPP1R3GB7ZBB8 358 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 EIF3FO00303 357 aaPredicted RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 PSMD14O00487 310 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 PRPF3O43395 683 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 ZBTB11O95625 1053 aaPredicted RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 KRT5P13647 590 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 KRT2P35908 639 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 PRAMEP78395 509 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 OTUD4Q01804 1114 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 DSG1Q02413 1049 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 CDKAL1Q5VV42 579 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 RGMBQ6NW40 437 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 TMTC3Q6ZXV5 915 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 TAS2R42Q7RTR8 314 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 ZSCAN29Q8IWY8 852 aaPredicted RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 ZNF507Q8TCN5 953 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 NSUN4Q96CB9 384 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 PPARGC1AQ9UBK2 798 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 SCAF8Q9UPN6 1271 aaKnown RBP8.92□□□□□ -0.98
NDE1-202ENST00000396355 ATP6V0A2Q9Y487 856 aa8.92□□□□□ -0.98
NDE1-202ENST00000396355 ANO9A1A5B4 782 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 HTR3EA5X5Y0 456 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 RNF225M0QZC1 329 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 MFN2O95140 757 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms