RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TRAIPQ9BWF2 469 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ITGA11Q9UKX5 1188 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ASXL3Q9C0F0 2248 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SPDYE16A6NNV3 312 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 IFNB1P01574 187 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 DR1Q01658 176 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 KIAA1841Q6NSI8 718 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 RIBC1Q8N443 379 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 REPS2Q8NFH8 660 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 DNAJC19Q96DA6 116 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 TAF1DQ9H5J8 278 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PRM3Q9NNZ6 103 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 KANSL3Q9P2N6 904 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 DPP7Q9UHL4 492 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF112Q9UJU3 913 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 C2CD2Q9Y426 696 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 M0R2N6 131 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 KRT37O76014 449 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 FNTAP49354 379 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ALDH5A1P51649 535 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 CYP27A1Q02318 531 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 C6orf118Q5T5N4 469 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ACTRT1Q8TDG2 376 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 APBB2Q92870 758 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 KLC2Q9H0B6 622 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ASCC2Q9H1I8 757 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 FAM96AQ9H5X1 160 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 BCAP29Q9UHQ4 241 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 MROH7Q68CQ1 1323 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 FAM205CA6NFA0 338 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SPATA31C2B4DYI2 1134 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ADCY8P40145 1251 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 KRT81Q14533 505 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 CENPUQ71F23 418 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PPTC7Q8NI37 304 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PPP2R3CQ969Q6 453 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 BLOC1S4Q9NUP1 217 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 MID2Q9UJV3 735 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 NFIBO00712 420 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 AKAP3O75969 853 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 HEXIM1O94992 359 aaKnown RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 NPTX2P47972 431 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 VGLL4Q14135 290 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 KLHDC7AQ5VTJ3 777 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 LRRC31Q6UY01 552 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SV2AQ7L0J3 742 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PLEKHH3Q7Z736 793 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 CLEC10AQ8IUN9 316 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ARHGAP24Q8N264 748 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF638Q14966 1978 aaKnown RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PSTPIP1O43586 416 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 KRT3P12035 628 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 TTC3P53804 2025 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 GUCY2DQ02846 1103 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 MESDQ14696 234 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ATF7IP2Q5U623 682 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PDXDC1Q6P996 788 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 URGCPQ8TCY9 931 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 FBF1Q8TES7 1133 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 UBLCP1Q8WVY7 318 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 AGPAT1Q99943 283 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 EFR3BQ9Y2G0 817 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SVILO95425 2214 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SLC16A4O15374 487 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 FGGP02679 453 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 GRIN1Q05586 938 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SV2CQ496J9 727 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 MUM1L1Q5H9M0 696 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PAPD7Q5XG87 772 aaKnown RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 C4orf32Q8N8J7 132 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 RAET1EQ8TD07 263 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 TMX1Q9H3N1 280 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ZWILCHQ9H900 591 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 RSAD1Q9HA92 442 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 AVENQ9NQS1 362 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SNED1Q8TER0 1413 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PRKCBP05771 671 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PDE4CQ08493 712 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 NFX1Q12986 1120 aaKnown RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 CCNJLQ8IV13 435 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 LRRC52Q8N7C0 313 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF564Q8TBZ8 553 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 PARD3BQ8TEW8 1205 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 RNF139Q8WU17 664 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 TMEM174Q8WUU8 243 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 TINF2Q9BSI4 451 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 CHST12Q9NRB3 414 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 NXF1Q9UBU9 619 aaKnown RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 CA12O43570 354 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 LPXNO60711 386 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 FTLP02792 175 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-203ENST00000395896 TMEM132DQ14C87 1099 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 DUSP28Q4G0W2 176 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 EFCAB12Q6NXP0 572 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 RNF34Q969K3 372 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SMC6Q96SB8 1091 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 FTHL17Q9BXU8 183 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 SFI1A8K8P3 1242 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 BTNL10A8MVZ5 291 aa3.6□□□□□ -1.83
VPS13C-203ENST00000395896 RNF40O75150 1001 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms