RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 BFSP2Q13515 415 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 RAPGEF1Q13905 1077 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 IQCEQ6IPM2 695 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 CD302Q8IX05 232 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 EFCAB13Q8IY85 973 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 ANKRD36BP1Q96IX9 119 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 MTMR12Q9C0I1 747 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 DNAJC12Q9UKB3 198 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 PYCARDQ9ULZ3 195 aa22.05■■□□□ 1.12
VCPKMT-202ENST00000395860 MEFVO15553 781 aaPredicted RBP22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 HLA-DRAP01903 254 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 TNNC2P02585 160 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 RFX1P22670 979 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 MSNP26038 577 aaKnown RBP22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 JADE1Q6IE81 842 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 PHLDB3Q6NSJ2 640 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 ANKLE1Q8NAG6 615 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 APOL6Q9BWW8 343 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 IPPQ9Y573 584 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 NFICP08651 508 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 FECHP22830 423 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 SFMBT2Q5VUG0 894 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 TRAF7Q6Q0C0 670 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 TRAPPC11Q7Z392 1133 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 DIS3LQ8TF46 1054 aaKnown RBP22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 NT5C1BQ96P26 610 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 PLEKHA5Q9HAU0 1116 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 UBE2TQ9NPD8 197 aaPredicted RBP22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 AJAP1Q9UKB5 411 aaPredicted RBP22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 PLAGL2Q9UPG8 496 aa22.04■■□□□ 1.12
VCPKMT-202ENST00000395860 ARHGAP6O43182 974 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 ZC3H11AO75152 810 aaKnown RBP eCLIP22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 RECQL4O94761 1208 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 VNN1O95497 513 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 WDR44Q5JSH3 913 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 CYP26C1Q6V0L0 522 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 LRRC8DQ7L1W4 858 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 TMTC1Q8IUR5 882 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 ARHGEF19Q8IW93 802 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 TMEM106CQ9BVX2 250 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 MYO6Q9UM54 1294 aa22.03■■□□□ 1.12
VCPKMT-202ENST00000395860 COL6A1P12109 1028 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 SELPP16109 830 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 HNRNPH3P31942 346 aaKnown RBP22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 TMEM132DQ14C87 1099 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 MEA1Q16626 185 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 WDR59Q6PJI9 974 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 ANKRD33Q7Z3H0 272 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 PPM1KQ8N3J5 372 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 SMG8Q8ND04 991 aaKnown RBP22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 SNX27Q96L92 541 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 PI4K2AQ9BTU6 479 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 FAM105AQ9NUU6 356 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 PARP2Q9UGN5 583 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 PCDHB2Q9Y5E7 798 aa22.02■■□□□ 1.12
VCPKMT-202ENST00000395860 DCDC2CA8MYV0 355 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 CLSTN1O94985 981 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 AKAP5P24588 427 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 JAM2P57087 298 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 NCOA4Q13772 614 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 NT5DC4Q86YG4 428 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 SYN2Q92777 582 aaPredicted RBP22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 STK33Q9BYT3 514 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 C1orf112Q9NSG2 853 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 C2CD2Q9Y426 696 aa22.02■■□□□ 1.11
VCPKMT-202ENST00000395860 TANC1Q9C0D5 1861 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 SOWAHDA6NJG2 315 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 TRPC3Q13507 836 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 MBTPS1Q14703 1052 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 ARHGAP44Q17R89 818 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 E4F1Q66K89 784 aaPredicted RBP22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 HACE1Q8IYU2 909 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 KIF12Q96FN5 646 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 CHP1Q99653 195 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 IMPG2Q9BZV3 1241 aa22.01■■□□□ 1.11
VCPKMT-202ENST00000395860 ESPNB1AK53 854 aa22■■□□□ 1.11
VCPKMT-202ENST00000395860 PITPNM1O00562 1244 aa22■■□□□ 1.11
VCPKMT-202ENST00000395860 DRAP1Q14919 205 aaPredicted RBP22■■□□□ 1.11
VCPKMT-202ENST00000395860 TRIM60Q495X7 471 aa22■■□□□ 1.11
VCPKMT-202ENST00000395860 C1orf53Q5VUE5 145 aa22■■□□□ 1.11
VCPKMT-202ENST00000395860 GPIHBP1Q8IV16 184 aa22■■□□□ 1.11
VCPKMT-202ENST00000395860 RNF39Q9H2S5 420 aa22■■□□□ 1.11
VCPKMT-202ENST00000395860 DERAQ9Y315 318 aa22■■□□□ 1.11
VCPKMT-202ENST00000395860 CST3P01034 146 aaPredicted RBP21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 STAT1P42224 750 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 MFAP3P55082 362 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 CDK17Q00537 523 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 DSC3Q14574 896 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 ASIC2Q16515 512 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 ALKAL1Q6UXT8 129 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 KIAA1524Q8TCG1 905 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 TATDN2Q93075 761 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 ELMO3Q96BJ8 720 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 TOX2Q96NM4 488 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 IFIH1Q9BYX4 1025 aaKnown RBP21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 C11orf49Q9H6J7 331 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 AIPL1Q9NZN9 384 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 KLK14Q9P0G3 267 aa21.99■■□□□ 1.11
VCPKMT-202ENST00000395860 CNTN3Q9P232 1028 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms