RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 PRLRP16471 622 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 DSTNP60981 165 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 B2MP61769 119 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 COG7P83436 770 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 RALGDSQ12967 914 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 NR1I3Q14994 352 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 PKN2Q16513 984 aaKnown RBP9.44□□□□□ -0.9
MSH5-205ENST00000395853 KCTD21Q4G0X4 260 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 C1orf74Q96LT6 269 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 ZNF184Q99676 751 aaPredicted RBP9.44□□□□□ -0.9
MSH5-205ENST00000395853 NUF2Q9BZD4 464 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 DNAI2Q9GZS0 605 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 SEMA4AQ9H3S1 761 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 ZNF408Q9H9D4 720 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 ZBTB21Q9ULJ3 1066 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 PCDHA7Q9UN72 937 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 ARPC4-TTLL3A0A0A6YYG9 625 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 ECE2O60344 883 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 SEC24DO94855 1032 aaPredicted RBP9.44□□□□□ -0.9
MSH5-205ENST00000395853 UNC5CO95185 931 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 PRCPP42785 496 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 GSSP48637 474 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 HSPA14Q0VDF9 509 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 CYB5R4Q7L1T6 521 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 DGLUCYQ7Z3D6 616 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 CTU1Q7Z7A3 348 aaKnown RBP9.44□□□□□ -0.9
MSH5-205ENST00000395853 PASD1Q8IV76 773 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 MICALL2Q8IY33 904 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 LRRC34Q8IZ02 419 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 SPARTQ8N0X7 666 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 FBXL16Q8N461 479 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 PAF1Q8N7H5 531 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 PEX13Q92968 403 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 SDCCAG3Q96C92 435 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 NEURL2Q9BR09 285 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 ARMT1Q9H993 441 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 KLHL42Q9P2K6 505 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 TRIM10Q9UDY6 481 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 TUBE1Q9UJT0 475 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 NOVA2Q9UNW9 492 aaKnown RBP9.44□□□□□ -0.9
MSH5-205ENST00000395853 ZMYM6O95789 1325 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 SALL1Q9NSC2 1324 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 MYH15Q9Y2K3 1946 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 A0A1B0GUL6 1792 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 KLF18A0A0U1RQI7 1052 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 SNX3O60493 162 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 TRPA1O75762 1119 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 RAD17O75943 681 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 FDPSP14324 419 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 ATP5DP30049 168 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 GYG1P46976 350 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 CARSP49589 748 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 MAGOHP61326 146 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 NIPAL4Q0D2K0 466 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 TGFBIQ15582 683 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 STK11Q15831 433 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 CDONQ4KMG0 1287 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 CCDC62Q6P9F0 684 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 RALYLQ86SE5 291 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 DDX42Q86XP3 938 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■□□□□ 8.3
MSH5-205ENST00000395853 CLVS1Q8IUQ0 354 aaPredicted RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 ALDH16A1Q8IZ83 802 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 AGGF1Q8N302 714 aaeCLIP9.43□□□□□ -0.9
MSH5-205ENST00000395853 FAM13CQ8NE31 585 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 PRPF31Q8WWY3 499 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 CELF1Q92879 486 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 MAGOHBQ96A72 148 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 UROC1Q96N76 676 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 NUP85Q9BW27 656 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 RXFP1Q9HBX9 757 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 EPB41L4AQ9HCS5 686 aaPredicted RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 RNF186Q9NXI6 227 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 DDX43Q9NXZ2 648 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 RPL26L1Q9UNX3 145 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 HPS5Q9UPZ3 1129 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 COQ6Q9Y2Z9 468 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 USP15Q9Y4E8 981 aaPredicted RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 YDJCA8MPS7 323 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 PRKAB2O43741 272 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 CNOT3O75175 753 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 SUN1O94901 812 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 FYNP06241 537 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 SLC10A3P09131 477 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 ZNF18P17022 549 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 VPS41P49754 854 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 BCAP31P51572 246 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 GBE1Q04446 702 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 RNASELQ05823 741 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 LPIN1Q14693 890 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 SF3B3Q15393 1217 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 OTUD7BQ6GQQ9 843 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 FAM47EQ6ZV65 393 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 HS2ST1Q7LGA3 356 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 KRT26Q7Z3Y9 468 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 CREG2Q8IUH2 290 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 SLC38A6Q8IZM9 456 aa9.43□□□□□ -0.9
MSH5-205ENST00000395853 DCPSQ96C86 337 aaKnown RBP9.43□□□□□ -0.9
MSH5-205ENST00000395853 GDF3Q9NR23 364 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms