RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 USH1GQ495M9 461 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 RBM44Q6ZP01 1051 aaKnown RBP12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 C14orf80Q86SX3 495 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 FAM83AQ86UY5 434 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 PPP2R3CQ969Q6 453 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 ERLEC1Q96DZ1 483 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 RILPQ96NA2 401 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 TRIM51Q9BSJ1 452 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 C4AP0C0L4 1744 aa12.02□□□□□ -0.48
RAPGEF3-202ENST00000395358 FGFR4P22455 802 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 ERVK-9P63128 1117 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 BASP1P80723 227 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 CMTR1Q8N1G2 835 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 DEPTORQ8TB45 409 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 HSPBAP1Q96EW2 488 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 TMEM47Q9BQJ4 181 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 PAIP1Q9H074 479 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 GPRC5DQ9NZD1 345 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 TTLL13PA6NNM8 815 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 TSPAN9O75954 239 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 BMP6P22004 513 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 KRT2P35908 639 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 HALP42357 657 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 RHBDL3P58872 404 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 TMED2Q15363 201 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 PPP1R14CQ8TAE6 165 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 CENPTQ96BT3 561 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 CELF4Q9BZC1 486 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 CTNNAL1Q9UBT7 734 aa12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 GPC6Q9Y625 555 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF3-202ENST00000395358 hCG_1642624A0A1W2PR95 340 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 MATN2O00339 956 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 NMT2O60551 498 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 ZBED4O75132 1171 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 RASA1P20936 1047 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 PTPREP23469 700 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 ATICP31939 592 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 RABGAP1LQ5R372 815 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 FKBP1CQ5VVH2 108 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 SCAIQ8N9R8 606 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 PDZD8Q8NEN9 1154 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 SLC26A7Q8TE54 656 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 ARHGEF3Q9NR81 526 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 MOSPD1Q9UJG1 213 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 SCAF8Q9UPN6 1271 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 PTPN22Q9Y2R2 807 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 REXO2Q9Y3B8 237 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 UBR3Q6ZT12 1888 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 MAGEB3O15480 346 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 FGGP02679 453 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 PLEKP08567 350 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 CDK7P50613 346 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 POLGP54098 1239 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 TMTC3Q6ZXV5 915 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 USP38Q8NB14 1042 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 TUBGCP5Q96RT8 1024 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 GLT8D2Q9H1C3 349 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 MYLK2Q9H1R3 596 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 A0A0J9YVX5 310 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 KRT18P05783 430 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 BMP3P12645 472 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 VEGFAP15692 232 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 PSMD6Q15008 389 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 PPP2R5EQ16537 467 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 SGMS1Q86VZ5 419 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 DGCR14Q96DF8 476 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 NUF2Q9BZD4 464 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 ARMCX3Q9UH62 379 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 PCDHB6Q9Y5E3 794 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 RCCD1A6NED2 376 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 USP17L5A8MUK1 530 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 TNFRSF8P28908 595 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 TRIP10Q15642 601 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 TRIM16LQ309B1 348 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 SH3D19Q5HYK7 790 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 FITM2Q8N6M3 262 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 C2orf69Q8N8R5 385 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 EPS8L3Q8TE67 593 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 ZNF333Q96JL9 665 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 MRPL1Q9BYD6 325 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 SMYD3Q9H7B4 428 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 UBN1Q9NPG3 1134 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 GID8Q9NWU2 228 aa12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 NOC2LQ9Y3T9 749 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-202ENST00000395358 RSPH10B2B2RC85 870 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 SOCS7O14512 581 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 MGEA5O60502 916 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 GAS8O95995 478 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 RSPH10BP0C881 870 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 HSPA8P11142 646 aaKnown RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 FDPSP14324 419 aaKnown RBP12□□□□□ -0.49
RAPGEF3-202ENST00000395358 IFNAR1P17181 557 aa12□□□□□ -0.49
RAPGEF3-202ENST00000395358 CA4P22748 312 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms